Transcript

cspg5b-202

ID
ZDB-TSCRIPT-090929-4496
Name
cspg5b-202 Nomenclature History
Previous Names
  • cspg5b-002
  • si:dkeyp-114f9.4-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000164337 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000164337.2|gene_biotype:protein_coding|ENSDARG00000099793.2 transcript_biotype:nonsense_mediated_decay gene_symbol:cspg5b cdna chromosome:GRCz11:19:19287163:19339287:-1
GTGCGACCGAGATACCGCAGTCCATGGTGTTGTGCAAATA
GTACCGAATCTCTCCGCTTCTAAGCGGACTCTTAATACTG
ACTACAAATAAGACACATGTAACCGTCTTAGCATCTTCTT
GAAGTTGGATAAGAGATGACGGATCCCTAGCGACGCATAA
GGTGGTCTGAATCTCGACCAAAGAGGAATAACATCTGAAG
ACAACATCCGAAGTTGGCAGGACACCGCGCGCTTCGTTAC
GCCTTCGATTTTTAGGAGATATCTGTTCAGGATTATTGCC
TAGATTCTTCTCAATATCTGCCGTATGACTTTACCTTTAA
CAGAAGATTGAGCTGGTTTAGTTTAAGTGTTTTTAAAGAC
AGTTAGTGTCATGATGAACTCTAGGCGCACGTTGTTTTCA
GCAGGTTGGGAGTCGATGGTGCTGTCCAGCGTCCTGCTTC
TTCACATTATTGCGCTGTGTGTGAATGGTGCAACATTCAG
GAGTATATCTGGAACAAGGGCTCCAGGTGTGAATCAGTCA
TTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGC
CGCCATCATGTTGCTTCTCCTCTTCATGGTTATAGTGTTT
TTCTCCAAGAGGCTGCATGTGCTTAAGACTGAAAACAGAC
GCCTTCGCAAGCACAGTAAGTACCGTCCAAAGTCGGAGCA
GCACATTGATAACTTCTCGCTGTCCACTGTTGCAGAGGGC
TCTCAGGCAAACGATGACACAAGCAAAGAAGAGCCATGCA
AATGTCCCCCTAAAGAGGACGAGTCTTTGAACAACCAGAA
CTCAGTCACGCCAAAACTGGAAAACGACAAGCCTGCCACA
GAGGACAATGCAGAGGAGGTAAACTCACCGCAGAACAATG
TGAACAACGTGTAGTAACACTTCATTGCCACACACTGGTG
CTGTGACTGACACACTCAAAGTTACTAAATTGGCTTAATT
AGTGGATTAATAATTGACATGGCACTCTTTCAGCCTCAAA
ATACACAAAGGAAACCCTGAACTAGCATGCTAGCGTATGT
TTGTGTGCTGTCACCATATGGTGGATTTCCAATTGCCAGA
CATTCACCTTGTCCTTGCTTGCTGTCACTGCTGATGTCAT
GCTGCACTGTGTTATGTCAACGCTTTGTTATGCTACGTCA
CGCTACACTATGACACTCTACACCCCTCAAAGCAAAGGTT
TAGCCATCAGGTTTTTAACCTTTGACCTTCAGTCCTCACC
GCTGTGACACCTTCACTATCTGAACTCCTGTCTGTCCTGC
CTTACTCTAGTCAGCATGCATTGGTGGTCTTTCGTAATAA
AGAAACTGTCTGTGGGAAATTATATAGCTAGACAGTGTCC
TAAAATTGACATTTGTAGATGTTTCTTGACTTCTTCAGTG
AGTAGGTCTGAATATATACTTACAAATACTGCTTGGATTG
GTATTTACATGCAGTATGATACTGTTTCGATGCGCAATGT
GTCTTGAAACTAACTGATTCGGATTATTTTGATGTACTGA
TTTTTTTTGTACTTTGCAATGTTTTTTTTTTTTTTTTTTG
TGAAAATTGAGAAATGAGAATAAATAAAGCCAGTTTGTTT
GGAATAAAAACAAATTGTACAATTACA

OTTDART00000019550 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000019550|OTTDARG00000015177|ZDB-GENE-060503-368 cspg5b|OTTDARP00000042249 cspg5b-002 LG_ CR626877.10 Danio rerio protein_coding KNOWN, 1627 bp
GTGCGACCGAGATACCGCAGTCCATGGTGTTGTGCAAATA
GTACCGAATCTCTCCGCTTCTAAGCGGACTCTTAATACTG
ACTACAAATAAGACACATGTAACCGTCTTAGCATCTTCTT
GAAGTTGGATAAGAGATGACGGATCCCTAGCGACGCATAA
GGTGGTCTGAATCTCGACCAAAGAGGAATAACATCTGAAG
ACAACATCCGAAGTTGGCAGGACACCGCGCGCTTCGTTAC
GCCTTCGATTTTTAGGAGATATCTGTTCAGGATTATTGCC
TAGATTCTTCTCAATATCTGCCGTATGACTTTACCTTTAA
CAGAAGATTGAGCTGGTTTAGTTTAAGTGTTTTTAAAGAC
AGTTAGTGTCATGATGAACTCTAGGCGCACGTTGTTTTCA
GCAGGTTGGGAGTCGATGGTGCTGTCCAGCGTCCTGCTTC
TTCACATTATTGCGCTGTGTGTGAATGGTGCAACATTCAG
GAGTATATCTGGAACAAGGGCTCCAGGTGTGAATCAGTCA
TTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGC
CGCCATCATGTTGCTTCTCCTCTTCATGGTTATAGTGTTT
TTCTCCAAGAGGCTGCATGTGCTTAAGACTGAAAACAGAC
GCCTTCGCAAGCACAGTAAGTACCGTCCAAAGTCGGAGCA
GCACATTGATAACTTCTCGCTGTCCACTGTTGCAGAGGGC
TCTCAGGCAAACGATGACACAAGCAAAGAAGAGCCATGCA
AATGTCCCCCTAAAGAGGACGAGTCTTTGAACAACCAGAA
CTCAGTCACGCCAAAACTGGAAAACGACAAGCCTGCCACA
GAGGACAATGCAGAGGAGGTAAACTCACCGCAGAACAATG
TGAACAACGTGTAGTAACACTTCATTGCCACACACTGGTG
CTGTGACTGACACACTCAAAGTTACTAAATTGGCTTAATT
AGTGGATTAATAATTGACATGGCACTCTTTCAGCCTCAAA
ATACACAAAGGAAACCCTGAACTAGCATGCTAGCGTATGT
TTGTGTGCTGTCACCATATGGTGGATTTCCAATTGCCAGA
CATTCACCTTGTCCTTGCTTGCTGTCACTGCTGATGTCAT
GCTGCACTGTGTTATGTCAACGCTTTGTTATGCTACGTCA
CGCTACACTATGACACTCTACACCCCTCAAAGCAAAGGTT
TAGCCATCAGGTTTTTAACCTTTGACCTTCAGTCCTCACC
GCTGTGACACCTTCACTATCTGAACTCCTGTCTGTCCTGC
CTTACTCTAGTCAGCATGCATTGGTGGTCTTTCGTAATAA
AGAAACTGTCTGTGGGAAATTATATAGCTAGACAGTGTCC
TAAAATTGACATTTGTAGATGTTTCTTGACTTCTTCAGTG
AGTAGGTCTGAATATATACTTACAAATACTGCTTGGATTG
GTATTTACATGCAGTATGATACTGTTTCGATGCGCAATGT
GTCTTGAAACTAACTGATTCGGATTATTTTGATGTACTGA
TTTTTTTTGTACTTTGCAATGTTTTTTTTTTTTTTTTTTG
TGAAAATTGAGAAATGAGAATAAATAAAGCCAGTTTGTTT
GGAATAAAAACAAATTGTACAATTACA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations