Transcript

si:ch211-238n5.4-201

ID
ZDB-TSCRIPT-090929-3394
Name
si:ch211-238n5.4-201 Nomenclature History
Previous Names
  • si:ch211-238n5.4-001
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000077076 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000077076.6|gene_biotype:protein_coding|ENSDARG00000062381.8 transcript_biotype:nonsense_mediated_decay gene_symbol:dennd11 cdna chromosome:GRCz11:18:20541850:20559990:-1
CGACAGCGTACGCCTGGGCAGCGTCTGTTCAGCTGTCTGG
ATTTACTACATTTCAGGACCGTTTGAATCGCAAGCGCTAT
GTTCCGTTTCACGCGTCGCGTTTGTGGCTCAGACTGACTG
CTCATCACCGAGCGTTACTTTGTTTATTTCCACCTTTATC
AGTATCGATAAACAAGAGTATGGTTGAGCAGTCGGATCGC
GCTCCGCTGCTGGACTGGGAGGAGATCCCCCCGGCCGAAC
TTGCTCCATCGGTTCCATCACCGGACACTGGCGATTCATT
ACAGTCCGGGCTATCAAGTTACCCAACTGAGGCCACATTA
GGGGCAGATATCACCTTGAACACGAGCCCGACGAGACCGA
GCAGTGTAGCAGCTGTTCATTCTCCTCATAAACAGCACAG
CGGCCCGGGAGGAGATGCTCTAGCTGAGGAGGATGAGCCG
GGAGACTGCGCCTTCCACGGGCTCTCGGTCAGGGACCGCA
GGATTACTGGATGGGAAGAGAAAGATCAAATCGTTGCTGT
GTTTGTGGTCACTTTCGACACAAGATCGGGGAACATGATA
GAATGGTGCCTACCTCATGATGTCAACCTGGAAGGAGTAG
AGTTCAAGTCTATGGCCAGCGGCTCCCATCGGATCTCAAG
TGACTTCATATATTTCCGCAAAGGCTGTTACTTTGGACTA
GCGTGCTTTGCTAACATGCCTGTGGAGAGTGAGCTGGAAC
GTGGAGCGAGGATGAAATCTGTCGGGATCTTGTCTCCTTC
ATACACATTGTTATACCGTTATATGCACTTCTTAGAAAAC
CAAGTCCGGCACCAGTTGCAGTGTCCAGGCCAATACTCTC
CACTGGAGGCTTTTTATGAGGATAAAAAGGCAGTGTTGCC
TTCGGGAGGAAATGGTTTGGTCACAGCTTGCCCAACCAGT
GCTCTTGCACCCATAGTCAACCGCTGCATGCATCCAGAGA
TGAAGATCACACACCCGGCTGGCTGCATGTCCCAGTTCAT
CCGCTTCTTTGGAGAGCAGATTATGGTTCTTTGGAAGTTT
GCTTTGCTCAGGAAACGCATCCTCATTTTCTCTCCTCCTC
CCGTCGGTGTGGTCTGCTATCGGGTTTATTGTTGCTGCTG
CCTTGCTAATGTGTCCATTCCTGGGATGGGTGTGTCTGTT
CCGGAGTTTCGCCCCTTCTTCTACATCAATGTTGCTGACA
TCCCTGCTCTTGAGACTGAACTGTCTTATGTGGCCTGTAC
CACAGAGAAGATCTTTGAGGAAAAGAAGGAGCTGTATGAT
GTGTACATTGACAATCAGAACGTGAAGACGCACAGAGAGA
GTCTCCAGCCTCTGCTTCGACTCAACAGTGCAGACAGAGA
GAAGTATCGCAAGCTCTGTGAGCAAAGGTACCAACATCTG
AACCTCTTATGAGAAAGAAAAAACAATAAAAGTATGTATT
TCCACAGGCATATGATCATATCAATGGGTTTCAGGCAGTT
GCTGCTGTACTCTCAGGAGGTGGATGGAGATTGCACATCC
AATGAGGAAGACCTCTTCATTCTGTTCTTCATGGAGCAGA
ACAACCGAATCTTCCAGACCCTGTCTGAGGTGGCGGTGAG
TGCCGATCCAACCCTGACTGCTGAGCACGTGCGAGCCATG
GGGCTGGATCCTCAAGGCGATCGCGGCTTCCTTGTGGACC
TGCTGGAAATCTACGGCATCGACGTCATGCTGGTTATCGA
CAACCCCTGCTGCCCCCAGTGCTGTTTGGGGGAACTGATG
TGATGTCCCCTATGGATATAAATCTGCTTGGACACCAGAG
AATTGGAATAACGGTCCATCATTTCCTGGATCTACATGTT
TTTTTTGTTTGTTTGCTGGGAACAACGGTTTAACGTCTGC
TCTGAATGTCATATATTATGTATTTCTAAAAAGTTTGATG
GTTGTTCATATTACACACTACTGTAACGGTGAGGATTTTC
ACAGTCTTCGCCACAACAATTCAATCATGTACATGTGAGA
AGTCATTTCATTTGGGGAAGAACCTGGGCAAAGTCAAAAG
TCAGTGTGTTATTTGTGATCTGTTGTGCATGGACTAATAG
ACACAAGTTTGGCTGCTGTAGTTTGACACGACATTTATTA
ATGTTCATGAATGGGAATGAACCACAATGTAGGAGGGTTT
CAGTCATCCTTGTTTAACTCTTCAAATGTTAACTAATGAA
TGTGACTGACCTTTCAATGCTGTCTACACCTGTTCGAGAT
GTTTCTGTTATATTACACACACACACACACACACACACAC
TGAACAGGTATCACTGTACTAAAAACAAATTAAATGGAGC
ATAGAATGTGCATTTGTTTATCCCGGATAGGCCTATAATC
ATTGTCATCATTGGTATTGAATGTAAATTGTACATTTAAT
GCTCCGGTTGATGCACACAGACGCTGCATTCATCTTTCTG
AAGAAATGAATGTGATTTCTGACTTTCTAATCGGTCAATG
CTCATGGTTATTTTTTGTTGTGTATATATTTGGGTTTGTC
ATTTAAATGTGTTTGAGTTGATCATTGCTGGATGACAGCA
GAAAGACTGAGCTGATTGACAGTGGTTGTGTTTATATGTT
CGTTCTATAAAGCCTAACTGGATGTTTAATAATTCATTGA
GCTGCATTAATAGAATAGAATATCTAAATGGAAAAGGATT
TACCCATTCATTTTACTGTCAGTTTCACTGTCCATCTAAT
TTTCAACATGCCAACAAATGTGACATTCGACTTTTGGAAT
TGAGTGCAGGCACTCAGGCTTGATGGAGAAAAGTTATTTA
AATCACCTAAATAAAATATTTAAATGAATAATAAATAATA
CTATTGCTTACAAACTAAA

OTTDART00000016327 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000016327|OTTDARG00000013717|ZDB-GENE-050419-80 si:ch211-238n5.4|OTTDARP00000013842 CH211-238N5.4-001 LG_ BX470166.11 Danio rerio protein_coding KNOWN, 2859 bp
CGACAGCGTACGCCTGGGCAGCGTCTGTTCAGCTGTCTGG
ATTTACTACATTTCAGGACCGTTTGAATCGCAAGCGCTAT
GTTCCGTTTCACGCGTCGCGTTTGTGGCTCAGACTGACTG
CTCATCACCGAGCGTTACTTTGTTTATTTCCACCTTTATC
AGTATCGATAAACAAGAGTATGGTTGAGCAGTCGGATCGC
GCTCCGCTGCTGGACTGGGAGGAGATCCCCCCGGCCGAAC
TTGCTCCATCGGTTCCATCACCGGACACTGGCGATTCATT
ACAGTCCGGGCTATCAAGTTACCCAACTGAGGCCACATTA
GGGGCAGATATCACCTTGAACACGAGCCCGACGAGACCGA
GCAGTGTAGCAGCTGTTCATTCTCCTCATAAACAGCACAG
CGGCCCGGGAGGAGATGCTCTAGCTGAGGAGGATGAGCCG
GGAGACTGCGCCTTCCACGGGCTCTCGGTCAGGGACCGCA
GGATTACTGGATGGGAAGAGAAAGATCAAATCGTTGCTGT
GTTTGTGGTCACTTTCGACACAAGATCGGGGAACATGATA
GAATGGTGCCTACCTCATGATGTCAACCTGGAAGGAGTAG
AGTTCAAGTCTATGGCCAGCGGCTCCCATCGGATCTCAAG
TGACTTCATATATTTCCGCAAAGGCTGTTACTTTGGACTA
GCGTGCTTTGCTAACATGCCTGTGGAGAGTGAGCTGGAAC
GTGGAGCGAGGATGAAATCTGTCGGGATCTTGTCTCCTTC
ATACACATTGTTATACCGTTATATGCACTTCTTAGAAAAC
CAAGTCCGGCACCAGTTGCAGTGTCCAGGCCAATACTCTC
CACTGGAGGCTTTTTATGAGGATAAAAAGGCAGTGTTGCC
TTCGGGAGGAAATGGTTTGGTCACAGCTTGCCCAACCAGT
GCTCTTGCACCCATAGTCAACCGCTGCATGCATCCAGAGA
TGAAGATCACACACCCGGCTGGCTGCATGTCCCAGTTCAT
CCGCTTCTTTGGAGAGCAGATTATGGTTCTTTGGAAGTTT
GCTTTGCTCAGGAAACGCATCCTCATTTTCTCTCCTCCTC
CCGTCGGTGTGGTCTGCTATCGGGTTTATTGTTGCTGCTG
CCTTGCTAATGTGTCCATTCCTGGGATGGGTGTGTCTGTT
CCGGAGTTTCGCCCCTTCTTCTACATCAATGTTGCTGACA
TCCCTGCTCTTGAGACTGAACTGTCTTATGTGGCCTGTAC
CACAGAGAAGATCTTTGAGGAAAAGAAGGAGCTGTATGAT
GTGTACATTGACAATCAGAACGTGAAGACGCACAGAGAGA
GTCTCCAGCCTCTGCTTCGACTCAACAGTGCAGACAGAGA
GAAGTATCGCAAGCTCTGTGAGCAAAGGTACCAACATCTG
AACCTCTTATGAGAAAGAAAAAACAATAAAAGTATGTATT
TCCACAGGCATATGATCATATCAATGGGTTTCAGGCAGTT
GCTGCTGTACTCTCAGGAGGTGGATGGAGATTGCACATCC
AATGAGGAAGACCTCTTCATTCTGTTCTTCATGGAGCAGA
ACAACCGAATCTTCCAGACCCTGTCTGAGGTGGCGGTGAG
TGCCGATCCAACCCTGACTGCTGAGCACGTGCGAGCCATG
GGGCTGGATCCTCAAGGCGATCGCGGCTTCCTTGTGGACC
TGCTGGAAATCTACGGCATCGACGTCATGCTGGTTATCGA
CAACCCCTGCTGCCCCCAGTGCTGTTTGGGGGAACTGATG
TGATGTCCCCTATGGATATAAATCTGCTTGGACACCAGAG
AATTGGAATAACGGTCCATCATTTCCTGGATCTACATGTT
TTTTTTGTTTGTTTGCTGGGAACAACGGTTTAACGTCTGC
TCTGAATGTCATATATTATGTATTTCTAAAAAGTTTGATG
GTTGTTCATATTACACACTACTGTAACGGTGAGGATTTTC
ACAGTCTTCGCCACAACAATTCAATCATGTACATGTGAGA
AGTCATTTCATTTGGGGAAGAACCTGGGCAAAGTCAAAAG
TCAGTGTGTTATTTGTGATCTGTTGTGCATGGACTAATAG
ACACAAGTTTGGCTGCTGTAGTTTGACACGACATTTATTA
ATGTTCATGAATGGGAATGAACCACAATGTAGGAGGGTTT
CAGTCATCCTTGTTTAACTCTTCAAATGTTAACTAATGAA
TGTGACTGACCTTTCAATGCTGTCTACACCTGTTCGAGAT
GTTTCTGTTATATTACACACACACACACACACACACACAC
TGAACAGGTATCACTGTACTAAAAACAAATTAAATGGAGC
ATAGAATGTGCATTTGTTTATCCCGGATAGGCCTATAATC
ATTGTCATCATTGGTATTGAATGTAAATTGTACATTTAAT
GCTCCGGTTGATGCACACAGACGCTGCATTCATCTTTCTG
AAGAAATGAATGTGATTTCTGACTTTCTAATCGGTCAATG
CTCATGGTTATTTTTTGTTGTGTATATATTTGGGTTTGTC
ATTTAAATGTGTTTGAGTTGATCATTGCTGGATGACAGCA
GAAAGACTGAGCTGATTGACAGTGGTTGTGTTTATATGTT
CGTTCTATAAAGCCTAACTGGATGTTTAATAATTCATTGA
GCTGCATTAATAGAATAGAATATCTAAATGGAAAAGGATT
TACCCATTCATTTTACTGTCAGTTTCACTGTCCATCTAAT
TTTCAACATGCCAACAAATGTGACATTCGACTTTTGGAAT
TGAGTGCAGGCACTCAGGCTTGATGGAGAAAAGTTATTTA
AATCACCTAAATAAAATATTTAAATGAATAATAAATAATA
CTATTGCTTACAAACTAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations