Transcript

emd-204

ID

ZDB-TSCRIPT-090929-22140

Name

emd-204 Nomenclature History

Previous Names

emd-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

emd (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000147916 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000147916.3|gene_biotype:protein_coding|ENSDARG00000095774.4 transcript_biotype:nonsense_mediated_decay gene_symbol:emd cdna chromosome:GRCz11:23:19813719:19821463:1
CCCAGCTCAGGAAAGCGCCTTTTTAACGTTCTGGAATCAT
TTACGATATGTCGTCATTAAGTGTGAAATCGGATAAAGAG
ATCTGCCAGCTGCTGGATGAATATGGCATCAAACATGGAC
CCATAAATCCACAAGGAAGCTCTATGAAAAAAAACTGAAT
GAGGCCATGGCCAAAAAAACCAAGCCTTCCTCACCTGACA
AAACATACTACAGAGAAGAACAGGAAGAAGTGGAATATGT
TACCTATCATCAGCCCCAGCAACAAACAAGACACGAAGTA
TATGGTGATGTCACAAGGAGATCAAAGGCCAGCGATTCAG
ATTTTGCCCACGATGTGGGGTCAAAGTTGTCAGCCTACAG
AGAAGATGTTGACTATACCAACGAGCCTGTCACCCGCCAG
TCTCACTCAGCCTATCAGAGCTCTTCTCGTCCACCAAGCT
CTAAACCCGTCCAGAGTGCAGAGAGCACAAAGTCTGCAGG
TGTGCCGGCGTGGCTGCGCATCCTGGTGTTTCTCATCATC
GCTGCCTTTTTGTATTATGTATACACATCTATGGAGCCAG
CAGAAGAGACGCCATTCAAAACCATTCAGTAGAACATATT
ATAGTCATCAGCCCCAACCAAAACTCACTTATTTAAACAA
CCACCAAAAATAGAGCTTGATCTAACGGCAAACCATGTTC
TCTGATAGAGTTGTTCTGCCACCACCAATTGGTGTAATAT
GTTAGTCAAATATTTGTCTTGCAGATTTTTATAAAGAAAC

OTTDART00000042416 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000042416|OTTDARG00000030599|ZDB-GENE-070501-2 emd|OTTDARP00000033735 emd-004 LG_ CR352234.11 Danio rerio protein_coding KNOWN, 760 bp
CCCAGCTCAGGAAAGCGCCTTTTTAACGTTCTGGAATCAT
TTACGATATGTCGTCATTAAGTGTGAAATCGGATAAAGAG
ATCTGCCAGCTGCTGGATGAATATGGCATCAAACATGGAC
CCATAAATCCACAAGGAAGCTCTATGAAAAAAAACTGAAT
GAGGCCATGGCCAAAAAAACCAAGCCTTCCTCACCTGACA
AAACATACTACAGAGAAGAACAGGAAGAAGTGGAATATGT
TACCTATCATCAGCCCCAGCAACAAACAAGACACGAAGTA
TATGGTGATGTCACAAGGAGATCAAAGGCCAGCGATTCAG
ATTTTGCCCACGATGTGGGGTCAAAGTTGTCAGCCTACAG
AGAAGATGTTGACTATACCAACGAGCCTGTCACCCGCCAG
TCTCACTCAGCCTATCAGAGCTCTTCTCGTCCACCAAGCT
CTAAACCCGTCCAGAGTGCAGAGAGCACAAAGTCTGCAGG
TGTGCCGGCGTGGCTGCGCATCCTGGTGTTTCTCATCATC
GCTGCCTTTTTGTATTATGTATACACATCTATGGAGCCAG
CAGAAGAGACGCCATTCAAAACCATTCAGTAGAACATATT
ATAGTCATCAGCCCCAACCAAAACTCACTTATTTAAACAA
CCACCAAAAATAGAGCTTGATCTAACGGCAAACCATGTTC
TCTGATAGAGTTGTTCTGCCACCACCAATTGGTGTAATAT
GTTAGTCAAATATTTGTCTTGCAGATTTTTATAAAGAAAC

Related Transcripts

Transcripts related to emd

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	emd-201 (1) Ensembl	Ensembl	1,143 nt	Select Tool
aberrant processed transcript	emd-204	Ensembl	760 nt
mRNA	emd-202 (1) Ensembl	Ensembl	1,566 nt	Select Tool
mRNA	emd-203 (1) Ensembl	Ensembl	866 nt	Select Tool
mRNA	emd-206 (1) Ensembl	Ensembl	285 nt	Select Tool ZFIN BLAST
ncRNA	emd-005 (1) Ensembl	Ensembl	887 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations