Transcript

samd11-202

ID
ZDB-TSCRIPT-090929-21849
Name
samd11-202 Nomenclature History
Previous Names
  • samd11-002
  • samd11l-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000146415 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000146415.2|gene_biotype:protein_coding|ENSDARG00000077852.5 transcript_biotype:nonsense_mediated_decay gene_symbol:samd11 cdna chromosome:GRCz11:23:23020709:23049140:1
GGAGACCCGTCATGCGAGCAGAGCACTGAGGAGAAGAGTG
AAGTGGTGAATGGCTGAACTTAAGCGCTCTGCTGTCAGGC
AGCGACGCGGGAGTCGTGCGTAAACACACCGGTGCGCCTG
GAACTCCGCGAACAGGGACACAAGTTGGGACGCATGAACT
GCTAATCACTCGTTGCCGGCGCTCCGCTTCGGGTAACATG
CCTGCCATCAAAAAGGAGAGACTGGATGGAGAAGACATGG
CATTAGCCGCCTTCAACCAGCCTGAATACCTGGCCCCTTT
AAATGCCACCGCTATCCCCGTGGTGACCCCTCATCCGCCG
CCGTACGATCACATTTTCGCCCATCACCAGCGCGCGTACT
TGGGCTTTCGCGACACCGCGCTGCATCAGCAGCACCTTCA
CCACCACCCGGACGACTTCATGCTGGAGAGCTTCTCGTCT
ATCCCGGACTTTCAGCCGTTTTTCGACAACGGGGAGCCTT
GTATCGAAGTGGAATGCGGGGAAAACAAAGCACTACTGTA
CATTAACAAACTGTGCCAGGGCAGCAAAGGGCCCTCCATC
AAATACCGGACTGAGTGGCTCACCCCAAACGAGTTCCAGT
TTGTCAGTGGAAGAGAGACAGCCAAAGACTGGAAACGCAG
TATCAGGCACAAGGGTAAGTCAGTTGCCGGGTGCACACGC
ATGGATGTTACTTTTGAAACGGGGGTTAATTGAGCTTTAG
TCCTCTTCTTGGGTTAACAGAAGAGCTTTTTTCTGGATAG
AAATGTGGGTTACTCAACTGCTGTAACTTTAGTGCGTTGG
GAACTAGAGCTCATTCTGCTTGGAGTCGAACGACTTTGGA
TTCTCACTGCTGGAACAAAAAGGGAAAAGTCTGAAGACAC
TTATGTCCAAAGGAATCTTACAAGTACATCCGCCTATCTG
TGACTGTCCCGGCTGTAGAATTTCATCTCCTGTGAACCGT
GGGCGACTGGCAGAGAAACGCACCATCCCTTTGCCGCCAA
CACGGGTGCCCAAAAAGGAGCTGGCCTCCGTTTTCAGCAG
TGACGACAGTGAGG

OTTDART00000042103 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000042103|OTTDARG00000030400|ZDB-GENE-060428-2 samd11|OTTDARP00000033525 DKEY-98J1.2-002 LG_none AL928977.10,AL845437.14 Danio rerio protein_coding NOVEL, 1054 bp
GGAGACCCGTCATGCGAGCAGAGCACTGAGGAGAAGAGTG
AAGTGGTGAATGGCTGAACTTAAGCGCTCTGCTGTCAGGC
AGCGACGCGGGAGTCGTGCGTAAACACACCGGTGCGCCTG
GAACTCCGCGAACAGGGACACAAGTTGGGACGCATGAACT
GCTAATCACTCGTTGCCGGCGCTCCGCTTCGGGTAACATG
CCTGCCATCAAAAAGGAGAGACTGGATGGAGAAGACATGG
CATTAGCCGCCTTCAACCAGCCTGAATACCTGGCCCCTTT
AAATGCCACCGCTATCCCCGTGGTGACCCCTCATCCGCCG
CCGTACGATCACATTTTCGCCCATCACCAGCGCGCGTACT
TGGGCTTTCGCGACACCGCGCTGCATCAGCAGCACCTTCA
CCACCACCCGGACGACTTCATGCTGGAGAGCTTCTCGTCT
ATCCCGGACTTTCAGCCGTTTTTCGACAACGGGGAGCCTT
GTATCGAAGTGGAATGCGGGGAAAACAAAGCACTACTGTA
CATTAACAAACTGTGCCAGGGCAGCAAAGGGCCCTCCATC
AAATACCGGACTGAGTGGCTCACCCCAAACGAGTTCCAGT
TTGTCAGTGGAAGAGAGACAGCCAAAGACTGGAAACGCAG
TATCAGGCACAAGGGTAAGTCAGTTGCCGGGTGCACACGC
ATGGATGTTACTTTTGAAACGGGGGTTAATTGAGCTTTAG
TCCTCTTCTTGGGTTAACAGAAGAGCTTTTTTCTGGATAG
AAATGTGGGTTACTCAACTGCTGTAACTTTAGTGCGTTGG
GAACTAGAGCTCATTCTGCTTGGAGTCGAACGACTTTGGA
TTCTCACTGCTGGAACAAAAAGGGAAAAGTCTGAAGACAC
TTATGTCCAAAGGAATCTTACAAGTACATCCGCCTATCTG
TGACTGTCCCGGCTGTAGAATTTCATCTCCTGTGAACCGT
GGGCGACTGGCAGAGAAACGCACCATCCCTTTGCCGCCAA
CACGGGTGCCCAAAAAGGAGCTGGCCTCCGTTTTCAGCAG
TGACGACAGTGAGG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations