Transcript

ca6-204

ID

ZDB-TSCRIPT-090929-21813

Name

ca6-204 Nomenclature History

Previous Names

ca6-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ca6 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000141127 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000141127.2|gene_biotype:protein_coding|ENSDARG00000056499.8 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:23:22643664:22650578:-1
TCTGCCATGAACAAGAGAACAGCATGAGAAACAGTTCAGA
GCACAGGCAGCATCACAATCACAGAGCATGGAGCAGCTGA
CTCTAGTCCTGCTATTCGTCACTTCGCTGAATTTCGCATC
GGCTGGAGTAGATGGAGATTATTGGACATATTCAGGAGAG
CTGGATCAGAAGCACTGGGCAGAAAAATATCATGACTGCG
GTGGCCAACAACAGTCTCCCATTGACATACAGCGGCGAAA
GGTGCGATATAGTCCACGAATGCAACAGCTCGAGCTGACA
GGTTATGAAGACATCCGCGGTTCCTTTCTCATGAAGAACA
ATGGCCATTCTGGTATGAACTGTTTCATCCGAAATGAAGA
TTCTTTTATAATTGGAAATTCAGCTGCCAAGCACCATGAA
GATTACCAAGGGGTTTCCACACCAATACACCGCCGTCCAA
ATGCATCTGCACTGGGGAGGCTGGGACTTGGAGGCCAGTG
GATCAGAGCACACAATGGACGGCATTCGCTACATGGCAGA
ACTTCACGTTGTCCACTACAACTCTGAAAAGTACCCCAGC
TTTGAAGAAGCCAAAAATAAACCTGATGGTCTTGCAGTTT
TAGCCTTCTTTTTTGAGGATGGGCATTTTGAGAACACGTA
CTACAGTGATTTTATTTCAAACCTGGCAAACATCAAATAC
GTAG

OTTDART00000042063 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000042063|OTTDARG00000030382|ZDB-GENE-030131-7091 ca6|OTTDARP00000033493 CH211-28E16.6-002 LG_ CR388207.13 Danio rerio protein_coding NOVEL, 684 bp
TCTGCCATGAACAAGAGAACAGCATGAGAAACAGTTCAGA
GCACAGGCAGCATCACAATCACAGAGCATGGAGCAGCTGA
CTCTAGTCCTGCTATTCGTCACTTCGCTGAATTTCGCATC
GGCTGGAGTAGATGGAGATTATTGGACATATTCAGGAGAG
CTGGATCAGAAGCACTGGGCAGAAAAATATCATGACTGCG
GTGGCCAACAACAGTCTCCCATTGACATACAGCGGCGAAA
GGTGCGATATAGTCCACGAATGCAACAGCTCGAGCTGACA
GGTTATGAAGACATCCGCGGTTCCTTTCTCATGAAGAACA
ATGGCCATTCTGGTATGAACTGTTTCATCCGAAATGAAGA
TTCTTTTATAATTGGAAATTCAGCTGCCAAGCACCATGAA
GATTACCAAGGGGTTTCCACACCAATACACCGCCGTCCAA
ATGCATCTGCACTGGGGAGGCTGGGACTTGGAGGCCAGTG
GATCAGAGCACACAATGGACGGCATTCGCTACATGGCAGA
ACTTCACGTTGTCCACTACAACTCTGAAAAGTACCCCAGC
TTTGAAGAAGCCAAAAATAAACCTGATGGTCTTGCAGTTT
TAGCCTTCTTTTTTGAGGATGGGCATTTTGAGAACACGTA
CTACAGTGATTTTATTTCAAACCTGGCAAACATCAAATAC
GTAG

Related Transcripts

Transcripts related to ca6

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ca6-203 (1) Ensembl	Ensembl	574 nt	Select Tool ZFIN BLAST
aberrant processed transcript	ca6-204	Ensembl	684 nt
mRNA	ca6-201 (1) Ensembl	Ensembl	2,804 nt	Select Tool ZFIN BLAST
mRNA	ca6-202 (1) Ensembl	Ensembl	1,965 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations