Transcript

lrrc58a-002

ID

ZDB-TSCRIPT-090929-21465

Name

lrrc58a-002 Nomenclature History

Previous Names

si:dkey-100g3.2-002

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

lrrc58a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000140846 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000140846.2|gene_biotype:protein_coding|ENSDARG00000076773.4 transcript_biotype:retained_intron gene_symbol:lrrc58a cdna chromosome:GRCz11:1:47486123:47490094:1
AGGCAGCAGCACTAAAGGGCATTTTCTAACGTTATAATGT
AATATATGTGTACAGATTACACATCAATAACTTGTAGATA
ACTTTCTTTTACATTGTCGCACCATTAGAAAGTGTGCTGC
CTAGCTTTATTTAATTCCCAGTGTTATTTTCCTCTTACTA
AACAGTCCATATGGCTCGTTTCCCAAGCGTAGACGACAAG
TGTGCAGTTTTACATTTATCCCGTCTGCATCTGGACGACC
TGAACTTGGATCATCTGGCGGACAGCAAAAGAAAACAGAT
CCAGCAGCTTCACCTTACCTACAACCGCCTGACGCTTCTC
CCGACTTCTGTCTGCTTTCTGTCCAACCTGGAGTATCTGG
ATATCAGCAATAACGCGCTCACGGTCATACCAGATGACAT
TATGCGATTGAAGAACTTAAAGACGTTTGTTGCAAAGAAT
AATCTTTTGAACGAGTGCTCGTTTCCGAAGGACTTCGACT
GCATTCGTGTGGAGACTCTGAATCTGAGTGGAAACAGGTT
TGAGGATATTCCCGCGCAGTTTCTCAAAATGACTACACTA
CAGTCCCTGTCCCTTGGAGGAAATAGGCTAAAGGCTATTC
CTGAAGAAATACAGAACCTGACCAGTCTAGAGATGCTGTA
TTTGGGAGGGAACCTCATCTCCTCGATCCCACCTGAGGTG
GCTAAACTCACCTGTCTGAGATACCTGGTCCTGTGTGACA
ATCGCATCCAAAGCGTACCACCCCAGCTCAACAAGTAAGA
TCTCCTCTTCCTTCTTTCTAAAGTCAAAGCAGGGTGGTGA
TTAAAAATAAACGACATCAGATTTCTTTTCTTTGTAGACT
ACACTCCCTGCTCTCTCTCA

OTTDART00000041413 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000041413|OTTDARG00000030042|ZDB-GENE-090312-76 lrrc58a|no_translation lrrc58a-002 LG_ CT737229.11 Danio rerio protein_coding NOVEL, 860 bp
AGGCAGCAGCACTAAAGGGCATTTTCTAACGTTATAATGT
AATATATGTGTACAGATTACACATCAATAACTTGTAGATA
ACTTTCTTTTACATTGTCGCACCATTAGAAAGTGTGCTGC
CTAGCTTTATTTAATTCCCAGTGTTATTTTCCTCTTACTA
AACAGTCCATATGGCTCGTTTCCCAAGCGTAGACGACAAG
TGTGCAGTTTTACATTTATCCCGTCTGCATCTGGACGACC
TGAACTTGGATCATCTGGCGGACAGCAAAAGAAAACAGAT
CCAGCAGCTTCACCTTACCTACAACCGCCTGACGCTTCTC
CCGACTTCTGTCTGCTTTCTGTCCAACCTGGAGTATCTGG
ATATCAGCAATAACGCGCTCACGGTCATACCAGATGACAT
TATGCGATTGAAGAACTTAAAGACGTTTGTTGCAAAGAAT
AATCTTTTGAACGAGTGCTCGTTTCCGAAGGACTTCGACT
GCATTCGTGTGGAGACTCTGAATCTGAGTGGAAACAGGTT
TGAGGATATTCCCGCGCAGTTTCTCAAAATGACTACACTA
CAGTCCCTGTCCCTTGGAGGAAATAGGCTAAAGGCTATTC
CTGAAGAAATACAGAACCTGACCAGTCTAGAGATGCTGTA
TTTGGGAGGGAACCTCATCTCCTCGATCCCACCTGAGGTG
GCTAAACTCACCTGTCTGAGATACCTGGTCCTGTGTGACA
ATCGCATCCAAAGCGTACCACCCCAGCTCAACAAGTAAGA
TCTCCTCTTCCTTCTTTCTAAAGTCAAAGCAGGGTGGTGA
TTAAAAATAAACGACATCAGATTTCTTTTCTTTGTAGACT
ACACTCCCTGCTCTCTCTCA

Related Transcripts

Transcripts related to lrrc58a

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	lrrc58a-201 (1) Ensembl	Ensembl		1,245 nt	Select Tool ZFIN BLAST
ncRNA	lrrc58a-002	Ensembl		860 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations