Transcript

col17a1a-201

ID
ZDB-TSCRIPT-090929-21444
Name
col17a1a-201 Nomenclature History
Previous Names
  • col17a1a-001
  • si:ch211-281g13.3-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000142957 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000142957.3|gene_biotype:protein_coding|ENSDARG00000069415.6 transcript_biotype:protein_coding gene_symbol:col17a1a cdna chromosome:GRCz11:1:49568335:49605854:1
ATTGCATGTAAAGCTGTAAAAAGCATGCATACCGGGTCCT
GGATTACTCATCACATGTGAACGTTCCTGCTCTCAAATAT
AATCTCTTTTTGGGGGCACAACTTTATACAGAAGAGCTCA
AGAAGAAGTAGAAGAAACTCATTTCTCTTAAATAAGAGGG
CAGTGGTTAACATGGAATGGACAAGCTAACAACAACCAAG
ATTGTTAAAGTTGAGGGGGGATCTGGAGGATCTGGAAAAG
AAATCCAGAAACATACAGAAACTGTGACGACTACAAGACT
GACATCTCTACCGCCAAAAGCCCACAGCGGCCAGCAGATA
CTGACCTCCATCGGGAACGGCTCAGGATCTGCAGGAGGAG
CTGTTTTGCTGGAGAAGAAGTTCATCACTCACAGCAGCGC
TGAAGGAGGAGCTTCCAGGAGTTATGTCATATCATCCTCC
TCATCTGGAAGTTCAGCCAGCAGCAGCTCAGGAGCAGGAT
CTGTGATCAGTGGATTTGACGGTATATCTGGCGAAATCAG
TGTAACCGGACCGATCACTAGCTCTACGGTTAAAAGCTCT
ACATCTGCAGTTAAAAGCTCTAGCGTGGTCTCTACCTCCA
TCACATCCTCGTCAGCCGCAGGCGGAGAGCTTTCCTCTGG
ATACGGCTCCATCTCCTCATCCTCCTCCGAGTTCGTGTCT
GGTTCCTCAGGAGGATCCATCAGTACTTCTGAAGGCAGCA
TGAGTAAATCTAGAAGCGGTGGAGGATCATCTGCAGTCAT
GTCTGGCGAAGGAACATCCAGCTCCAAGACTGTGTCCAAA
TTCAGCTCCTCGTCCCCTAGTGGAACAAGGAAAGGTTTGA
GTTACAGCACAGTTCCTACTGAGAGGAAGACCATTATGAA
CATTACCACAGGAGGATATGAGGGGAGCTCCAGTGGCAAT
TCCTCCCCTGAGTACATAAAGAAAGACAGTGCTGCCACCA
GAGGGCGCACTCAAACACGAGAGAGTGAGATCAGAGCCAG
ACTGCAGAGCGCCTCGCCCTCCGCTAGATGGACAGAGTTG
GATGATGTGAAGAGATTACTGAAGGGAAGTCGCTCTGGGA
GCATCAGTCCACCACGTTCTCCCACCAGCACTCTCCCTAT
CCCCAAAAAAGCCAGCATTGACGTACGCCACGAGAGCCAG
TCAGGCTTTGATGGCACAGTTTTGGATGCTGGATTCAGTG
GATATTACACCAATCCCAACAATCTCAGTTACACCACATT
GCAACAACCATCATCACCCACAGGCGGCATGCAAAACAAT
CTGACCCTCAGTTCATCTGCCCTTGATACTACAGTGTATG
GGATGCAGAATAACCTGTCTACATCTGGCGGTGCTATGAT
GGCTAATGGAAGGTGCACTGGCTATGTGTATGGGGTCCCG
AAAAATGTTGGCAGCGCTGGATTGGCCACTACTATTTCTG
CTATTCCAAGCAGTCCTATCACCGCTGATGACGTGTTTAT
GAAAGATGGCAAGTTAATTGCGATTGGGAAGGAAAATGTA
GCGGCTAAGACAGAGACCGAGAGGCTGATCATGTCCAAAA
ACACTGGCAAACAGTTCGTCCCTTCATCCTTCAATGCTGG
AGCAGACACGTTTTCTGAAGATTCACTCAAGAGGGAGAAA
AAGATGATCTCGAGCGCCACAGATCCACAGACCACCACCA
TTACTGGTTCCAAATCCTCAACAAAAAACAAAGCAACATA
TGCAGATATTCGTAAAGATGATTCCGACGGCGCTGGATGT
GGATTCTGGACGTGTTGCTCGTGGTGGAAATGGCTTCTGG
CTTTGTTATTTGCTCTTCTCCTTCTGCTGGGACTCCTCTG
TGGACTGATCGCACTAGGTGAGCAGCTGAGGAGGCTGAAG
GCTCGTGTGGATGCTATCGATGGTGGAGGAACCTCTCCTC
GAACCAGCGGTTTGAAAACTGACGACATTCCTGGGGTCCA
ATCTGGTAACACGATAAACCTGGGTTATGAACCTGCTGGG
CAAGATTCGTTGATCCTGCAGAGAGCTATCCTGAGAGAGC
TGCAGTCGGACACCATCAGAGCATCGCTGGCAACTTCGCT
CAGGGGAGAGAGAGGAGAACCTGGACCTAAAGGAGACCAA
GGGCCTCCTGGAGTTAAAGGTGATTCAGGATTTCCCGGGA
TTCCAGGTCCTCCTGGTCTTATTGGTCATCCTGGACAGGA
AGGCCCTCGAGGACCCAAAGGGAGCGCAGGTGAATCAGGA
AGTGATGGTTTACCTGGACCGAGGGGTCGTGAAGGTCCAG
CGGGTCCCAGAGGAGAACCAGGACCCCCAGGAATTGGGGA
GAAAGGAGAGAAAGGCTCATTTGGTGATGTTGGCGCTCCT
GGGATAGCAGGACCACCAGGACCCGTAGGGCCCAAAGGTG
ATGCAGGTGCACAAGGAGTACCGGGACTTACAGGAGCACC
TGGACCCCAAGGCTTCCGCGGAGATTCTGGTGATCCCGGA
CCCAAGGGTGATAAAGGACCTGCTGGGCCACCTGGGGTCA
AAGGTGATCAGGGAGAGAGAGGACCACGTGGCGCCACTGG
TGAGCCGGGTCAGCCTGGACCAGCAGGTCCTCCTGGTGAG
AAAGGTCTTAAGGGATCAACAGGTGCACCAGGACCAGATG
GTGTTAAAGGACTTAGGGGTGACCAAGGACCCGTTGGGTT
GCCTGGTGCTCGAGGACCATCAGGACCTCCCGGAGATTCA
GGAATACCAGGAACACCAGGACTCCAAGGACCACCAGGAC
TGCCAGGTACACCAGGCCAACCAGGAGCTAAAGGTGAGGC
CGGTGAGCCTGGAAGAGTCATTTCTGCAGGCGCTAATGCT
AACACGGTGGCTGTATCTGGACCACCAGGACCTCCTGGAG
CTCCAGGTCCTGCTGGTCCACCTGGACTATCAGGTCCTAT
TGGTCCTGCTGGTCTTCCTGGTTCACCTGGTGCAAAGGGA
GATAAAGGAGACAAAGGAGAGGATGGGAAACCTGGAGTCA
CTGAGAGTGCAGGGAAGAAATCAGAAGCAGGGGAACCCGG
TCCTCCAGGACCACCAGGACCTCCAGGACCACCCGGGGAT
GATGGAAAGCCAGGTGTTGGAGAACCTGGTCCAGCTGGTC
CTCCTGGTGAAAAAGGTGAACCTGGAAGCTTTGTACCTAC
TTCAGAAACATTCTTTGCTGGACCACCTGGGCCTCCTGGA
CCTATTGGACCAAAGGGATCACAAGGTGATGTTGGCCCTC
AAGGTTTCCCTGGTCAACCTGGATTACCTGGAGAACCTGG
AATTGGTATTCCAGGACAGCCGGGATCACCAGGACCACGT
GGAGAGCAAGGTCTTGATGGTCCACTTGGACCACAGGGAC
CTCAAGGGCCAATGGGTCCCATGGGCCCAGAAGGTCCAAA
AGGTGATGCTGGAGTCCCAGGTGCCCCTGGTATTCCAGGT
TATTCTTACGGTGGAGGATCCAGAAGTGCTCCGGGACCAC
CAGGTCCACCTGGACCCCCAGGGCCTCCTGGAGAACCAGG
TTCTCAAGGTGACGGGTCACCGAATGCTGTTCAACAGATT
TCAGACTACCTCAGAAGTGAGCCCATTAGACAATACCTAG
CTGGACCTCCAGGCCCGCCTGGACCACCAGGTCCCTCTGG
ATCAGCCTCTGATGATGCTCTGGCTAGCAGAGTCATTGAA
TATCTTCAACGAGATGAGGTGAGACAGTACCTGATTGGTC
CTCCAGGACCCCCGGGACCACCAGGTGTGCCAGGTGGATA
TGGCTTTAACACTCAGGAAGTGGCAGGACGAGTGATGAGC
CTTATTAACGATGCTGGTTTTAGAGGTTTACCAGGACCTC
CCGGCCCACCAGGACCTCAAGGACCTCCTGGAAACTCTGG
AGGACTGGTGTCTTACGCTGCTAACGAAAACCAGCAGCAC
ATCCGCGCAGAGCCGCAGGAGTACATCAAGAGCCATCCAA
GGGCTGATGAGAATTTGGATTACACAGCCATCGCTAAACA
GGTTTCAGATTACATTAAGGCTCATGGCCTGTTAAATGGA
AATGCTGGCTTTCCAGGTGCACCAGGTCGTCAAGGATATC
CTGGACCACCAGGGTTTCCAGGAGAGCCCGGAACACCAGG
ACAGCCTGGACCACCAGGACAGGCTGGACCACCAGGACTG
CCTGGACCACCAGGACTCGACACTGTACACAATTACTCCA
ACATGACTGCTGTCTTGGACTACATCAAAGAAAATCATAT
GAAAGGACAAAAAGGCGACCTGGGATTTCCAGGAATTCCA
GGATCCCCAGGTATTGATGGTAAACAAGGCATAGTAGGCT
TACCAGGCATAAAGGGACAAAAAGGAGAAAGAGGTGAAGC
AACATACGTCAACCGAAGGAGGAGGAGGAGCACAGTAATT
TAGGCACACAGCAGTGTGTTTAGCTGGTTTGCATTAATAC
ACCATATCTTAATAAGACGTGATGGGATATGATTACAGAA
ACAATAACACAAGACTGCAACACATGACAAGATTAGGCTC
TCTCTGCACTTGTATTTTCTATATTGTTAGGACTTCTGGT
CAAAGGCCAGGGTAGCCGTTTTCCCGCACTATTAGGCTCT
TTTGAAAATGCAGTTGCGGGTTGTTGATTTGTGAGCTACT
TTCATACCATGCCATGGCCTCTAAATAAAAATATCGGCTG
TTTCTCAATACCAAGTATGCAAAGTTTGGACTTGCGTCCT
TGGAAGTTCAGAGCTGCCAAGTTCA

OTTDART00000041391 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000041391|OTTDARG00000030023|ZDB-GENE-090313-107 col17a1a|OTTDARP00000033062 col17a1a-001 LG_ BX321880.9 Danio rerio protein_coding KNOWN, 4745 bp
ATTGCATGTAAAGCTGTAAAAAGCATGCATACCGGGTCCT
GGATTACTCATCACATGTGAACGTTCCTGCTCTCAAATAT
AATCTCTTTTTGGGGGCACAACTTTATACAGAAGAGCTCA
AGAAGAAGTAGAAGAAACTCATTTCTCTTAAATAAGAGGG
CAGTGGTTAACATGGAATGGACAAGCTAACAACAACCAAG
ATTGTTAAAGTTGAGGGGGGATCTGGAGGATCTGGAAAAG
AAATCCAGAAACATACAGAAACTGTGACGACTACAAGACT
GACATCTCTACCGCCAAAAGCCCACAGCGGCCAGCAGATA
CTGACCTCCATCGGGAACGGCTCAGGATCTGCAGGAGGAG
CTGTTTTGCTGGAGAAGAAGTTCATCACTCACAGCAGCGC
TGAAGGAGGAGCTTCCAGGAGTTATGTCATATCATCCTCC
TCATCTGGAAGTTCAGCCAGCAGCAGCTCAGGAGCAGGAT
CTGTGATCAGTGGATTTGACGGTATATCTGGCGAAATCAG
TGTAACCGGACCGATCACTAGCTCTACGGTTAAAAGCTCT
ACATCTGCAGTTAAAAGCTCTAGCGTGGTCTCTACCTCCA
TCACATCCTCGTCAGCCGCAGGCGGAGAGCTTTCCTCTGG
ATACGGCTCCATCTCCTCATCCTCCTCCGAGTTCGTGTCT
GGTTCCTCAGGAGGATCCATCAGTACTTCTGAAGGCAGCA
TGAGTAAATCTAGAAGCGGTGGAGGATCATCTGCAGTCAT
GTCTGGCGAAGGAACATCCAGCTCCAAGACTGTGTCCAAA
TTCAGCTCCTCGTCCCCTAGTGGAACAAGGAAAGGTTTGA
GTTACAGCACAGTTCCTACTGAGAGGAAGACCATTATGAA
CATTACCACAGGAGGATATGAGGGGAGCTCCAGTGGCAAT
TCCTCCCCTGAGTACATAAAGAAAGACAGTGCTGCCACCA
GAGGGCGCACTCAAACACGAGAGAGTGAGATCAGAGCCAG
ACTGCAGAGCGCCTCGCCCTCCGCTAGATGGACAGAGTTG
GATGATGTGAAGAGATTACTGAAGGGAAGTCGCTCTGGGA
GCATCAGTCCACCACGTTCTCCCACCAGCACTCTCCCTAT
CCCCAAAAAAGCCAGCATTGACGTACGCCACGAGAGCCAG
TCAGGCTTTGATGGCACAGTTTTGGATGCTGGATTCAGTG
GATATTACACCAATCCCAACAATCTCAGTTACACCACATT
GCAACAACCATCATCACCCACAGGCGGCATGCAAAACAAT
CTGACCCTCAGTTCATCTGCCCTTGATACTACAGTGTATG
GGATGCAGAATAACCTGTCTACATCTGGCGGTGCTATGAT
GGCTAATGGAAGGTGCACTGGCTATGTGTATGGGGTCCCG
AAAAATGTTGGCAGCGCTGGATTGGCCACTACTATTTCTG
CTATTCCAAGCAGTCCTATCACCGCTGATGACGTGTTTAT
GAAAGATGGCAAGTTAATTGCGATTGGGAAGGAAAATGTA
GCGGCTAAGACAGAGACCGAGAGGCTGATCATGTCCAAAA
ACACTGGCAAACAGTTCGTCCCTTCATCCTTCAATGCTGG
AGCAGACACGTTTTCTGAAGATTCACTCAAGAGGGAGAAA
AAGATGATCTCGAGCGCCACAGATCCACAGACCACCACCA
TTACTGGTTCCAAATCCTCAACAAAAAACAAAGCAACATA
TGCAGATATTCGTAAAGATGATTCCGACGGCGCTGGATGT
GGATTCTGGACGTGTTGCTCGTGGTGGAAATGGCTTCTGG
CTTTGTTATTTGCTCTTCTCCTTCTGCTGGGACTCCTCTG
TGGACTGATCGCACTAGGTGAGCAGCTGAGGAGGCTGAAG
GCTCGTGTGGATGCTATCGATGGTGGAGGAACCTCTCCTC
GAACCAGCGGTTTGAAAACTGACGACATTCCTGGGGTCCA
ATCTGGTAACACGATAAACCTGGGTTATGAACCTGCTGGG
CAAGATTCGTTGATCCTGCAGAGAGCTATCCTGAGAGAGC
TGCAGTCGGACACCATCAGAGCATCGCTGGCAACTTCGCT
CAGGGGAGAGAGAGGAGAACCTGGACCTAAAGGAGACCAA
GGGCCTCCTGGAGTTAAAGGTGATTCAGGATTTCCCGGGA
TTCCAGGTCCTCCTGGTCTTATTGGTCATCCTGGACAGGA
AGGCCCTCGAGGACCCAAAGGGAGCGCAGGTGAATCAGGA
AGTGATGGTTTACCTGGACCGAGGGGTCGTGAAGGTCCAG
CGGGTCCCAGAGGAGAACCAGGACCCCCAGGAATTGGGGA
GAAAGGAGAGAAAGGCTCATTTGGTGATGTTGGCGCTCCT
GGGATAGCAGGACCACCAGGACCCGTAGGGCCCAAAGGTG
ATGCAGGTGCACAAGGAGTACCGGGACTTACAGGAGCACC
TGGACCCCAAGGCTTCCGCGGAGATTCTGGTGATCCCGGA
CCCAAGGGTGATAAAGGACCTGCTGGGCCACCTGGGGTCA
AAGGTGATCAGGGAGAGAGAGGACCACGTGGCGCCACTGG
TGAGCCGGGTCAGCCTGGACCAGCAGGTCCTCCTGGTGAG
AAAGGTCTTAAGGGATCAACAGGTGCACCAGGACCAGATG
GTGTTAAAGGACTTAGGGGTGACCAAGGACCCGTTGGGTT
GCCTGGTGCTCGAGGACCATCAGGACCTCCCGGAGATTCA
GGAATACCAGGAACACCAGGACTCCAAGGACCACCAGGAC
TGCCAGGTACACCAGGCCAACCAGGAGCTAAAGGTGAGGC
CGGTGAGCCTGGAAGAGTCATTTCTGCAGGCGCTAATGCT
AACACGGTGGCTGTATCTGGACCACCAGGACCTCCTGGAG
CTCCAGGTCCTGCTGGTCCACCTGGACTATCAGGTCCTAT
TGGTCCTGCTGGTCTTCCTGGTTCACCTGGTGCAAAGGGA
GATAAAGGAGACAAAGGAGAGGATGGGAAACCTGGAGTCA
CTGAGAGTGCAGGGAAGAAATCAGAAGCAGGGGAACCCGG
TCCTCCAGGACCACCAGGACCTCCAGGACCACCCGGGGAT
GATGGAAAGCCAGGTGTTGGAGAACCTGGTCCAGCTGGTC
CTCCTGGTGAAAAAGGTGAACCTGGAAGCTTTGTACCTAC
TTCAGAAACATTCTTTGCTGGACCACCTGGGCCTCCTGGA
CCTATTGGACCAAAGGGATCACAAGGTGATGTTGGCCCTC
AAGGTTTCCCTGGTCAACCTGGATTACCTGGAGAACCTGG
AATTGGTATTCCAGGACAGCCGGGATCACCAGGACCACGT
GGAGAGCAAGGTCTTGATGGTCCACTTGGACCACAGGGAC
CTCAAGGGCCAATGGGTCCCATGGGCCCAGAAGGTCCAAA
AGGTGATGCTGGAGTCCCAGGTGCCCCTGGTATTCCAGGT
TATTCTTACGGTGGAGGATCCAGAAGTGCTCCGGGACCAC
CAGGTCCACCTGGACCCCCAGGGCCTCCTGGAGAACCAGG
TTCTCAAGGTGACGGGTCACCGAATGCTGTTCAACAGATT
TCAGACTACCTCAGAAGTGAGCCCATTAGACAATACCTAG
CTGGACCTCCAGGCCCGCCTGGACCACCAGGTCCCTCTGG
ATCAGCCTCTGATGATGCTCTGGCTAGCAGAGTCATTGAA
TATCTTCAACGAGATGAGGTGAGACAGTACCTGATTGGTC
CTCCAGGACCCCCGGGACCACCAGGTGTGCCAGGTGGATA
TGGCTTTAACACTCAGGAAGTGGCAGGACGAGTGATGAGC
CTTATTAACGATGCTGGTTTTAGAGGTTTACCAGGACCTC
CCGGCCCACCAGGACCTCAAGGACCTCCTGGAAACTCTGG
AGGACTGGTGTCTTACGCTGCTAACGAAAACCAGCAGCAC
ATCCGCGCAGAGCCGCAGGAGTACATCAAGAGCCATCCAA
GGGCTGATGAGAATTTGGATTACACAGCCATCGCTAAACA
GGTTTCAGATTACATTAAGGCTCATGGCCTGTTAAATGGA
AATGCTGGCTTTCCAGGTGCACCAGGTCGTCAAGGATATC
CTGGACCACCAGGGTTTCCAGGAGAGCCCGGAACACCAGG
ACAGCCTGGACCACCAGGACAGGCTGGACCACCAGGACTG
CCTGGACCACCAGGACTCGACACTGTACACAATTACTCCA
ACATGACTGCTGTCTTGGACTACATCAAAGAAAATCATAT
GAAAGGACAAAAAGGCGACCTGGGATTTCCAGGAATTCCA
GGATCCCCAGGTATTGATGGTAAACAAGGCATAGTAGGCT
TACCAGGCATAAAGGGACAAAAAGGAGAAAGAGGTGAAGC
AACATACGTCAACCGAAGGAGGAGGAGGAGCACAGTAATT
TAGGCACACAGCAGTGTGTTTAGCTGGTTTGCATTAATAC
ACCATATCTTAATAAGACGTGATGGGATATGATTACAGAA
ACAATAACACAAGACTGCAACACATGACAAGATTAGGCTC
TCTCTGCACTTGTATTTTCTATATTGTTAGGACTTCTGGT
CAAAGGCCAGGGTAGCCGTTTTCCCGCACTATTAGGCTCT
TTTGAAAATGCAGTTGCGGGTTGTTGATTTGTGAGCTACT
TTCATACCATGCCATGGCCTCTAAATAAAAATATCGGCTG
TTTCTCAATACCAAGTATGCAAAGTTTGGACTTGCGTCCT
TGGAAGTTCAGAGCTGCCAAGTTCA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations