Transcript

ccar1-003

ID

ZDB-TSCRIPT-090929-20722

Name

ccar1-003 Nomenclature History

Previous Names

si:dkey-85g17.2-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

ccar1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000143350 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000143350.2|gene_biotype:protein_coding|ENSDARG00000074759.5 transcript_biotype:retained_intron gene_symbol:ccar1 cdna chromosome:GRCz11:13:18394547:18400922:1
GATTAATAAAGGGAATAAGCTAAAAAGAAAATGAATGAAT
GAATGATTAAATGTTGGAAAGCAGAGAATTGCCCAGCTTT
AATCTTTAGCATTTTTATGCGTTATAAAGTGGTTGTGCAT
ACTTGCAACCTGTCTCTTCTGCTCCATCTTTTCTTTTTCA
GAGCCAGCCACAAGTCCCGAATATGATGAAACCAGGTCCC
ACCATGCTTCAGTCTCTACCCCCACCCACCACATTCAGTG
TCCCAGCACAGGGGCCTCCTCCATCTCTCCTGCAGGCCCA
GCTCTCCGCTGCATCTCTGGCTCCTCTCCTGCAGAACCCA
CCGCAGCCACTGCTGCCCCAGCCACCCCCTAAAGATTCTG
TGTTTTCTGGAGGTTTGCTGCAGCCTCCAGTGCGGATGAT
GCCTCAGCCTCAGCAGGTGAGGCGTGTCGAGCCCTCGCCC
CGCTTCCCCAACCGCAGTGACCGGCCAGAGCTCATCCTAA
GGAAAGATGATCGCAGTCGTGAAAGAGAGAGAGAGAGAAG
ACGATCGAGAGAACGCTCACCCATGCGGAAACGCTCTAGA
GATCGCTCTCCTCGGCGAGAACGTTCACCAAGACGGCCAC
GCAGAGTTGTTCCAAGATATACTGTGCAGTTCTCCAAATT
CTCTCTCGATGGATACAATTGTGATATGATGGAG

OTTDART00000040603 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000040603|OTTDARG00000029570|ZDB-GENE-030131-146 ccar1|no_translation DKEY-85G17.2-003 LG_ BX927142.17 Danio rerio protein_coding NOVEL, 674 bp
GATTAATAAAGGGAATAAGCTAAAAAGAAAATGAATGAAT
GAATGATTAAATGTTGGAAAGCAGAGAATTGCCCAGCTTT
AATCTTTAGCATTTTTATGCGTTATAAAGTGGTTGTGCAT
ACTTGCAACCTGTCTCTTCTGCTCCATCTTTTCTTTTTCA
GAGCCAGCCACAAGTCCCGAATATGATGAAACCAGGTCCC
ACCATGCTTCAGTCTCTACCCCCACCCACCACATTCAGTG
TCCCAGCACAGGGGCCTCCTCCATCTCTCCTGCAGGCCCA
GCTCTCCGCTGCATCTCTGGCTCCTCTCCTGCAGAACCCA
CCGCAGCCACTGCTGCCCCAGCCACCCCCTAAAGATTCTG
TGTTTTCTGGAGGTTTGCTGCAGCCTCCAGTGCGGATGAT
GCCTCAGCCTCAGCAGGTGAGGCGTGTCGAGCCCTCGCCC
CGCTTCCCCAACCGCAGTGACCGGCCAGAGCTCATCCTAA
GGAAAGATGATCGCAGTCGTGAAAGAGAGAGAGAGAGAAG
ACGATCGAGAGAACGCTCACCCATGCGGAAACGCTCTAGA
GATCGCTCTCCTCGGCGAGAACGTTCACCAAGACGGCCAC
GCAGAGTTGTTCCAAGATATACTGTGCAGTTCTCCAAATT
CTCTCTCGATGGATACAATTGTGATATGATGGAG

Related Transcripts

Transcripts related to ccar1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ccar1-201 (1) Ensembl	Ensembl	4,655 nt	Select Tool ZFIN BLAST
mRNA	ccar1-202 (1) Ensembl	Ensembl	860 nt	Select Tool ZFIN BLAST
ncRNA	ccar1-003	Ensembl	674 nt
ncRNA	ccar1-004 (1) Ensembl	Ensembl	744 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations