Transcript

hccsb-202

ID

ZDB-TSCRIPT-090929-19453

Name

hccsb-202 Nomenclature History

Previous Names

hccs-002
hccsb-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

hccsb (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000169854 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000169854.2|gene_biotype:protein_coding|ENSDARG00000099358.3 transcript_biotype:nonsense_mediated_decay gene_symbol:hccsb cdna chromosome:GRCz11:24:31084689:31090948:-1
GGCTGGTGTTCATCATGGGCGCATCCGTATCCAGTCTTGC
TCCCACTATTCGGGCAGAGTCTGTGATTTCCGCTCCTCAT
TTTGCCGGTGCTTCTCCTCCCCCCGGGTGTCCCATGCATC
AGGAGCCTCCCAAAATAGCAATAATTGATCATGTGTAATG
TAAACCCAGGCTCTCCGCCTCCTGAGTGCCCGATGCATCA
GGCTCAGACACCACCGGCTGCTCCTGTGCATCAGGAAAGA
GCTTACGAGTTTGTCGAATGTCCCATGAGGGCCAAAGAAG
GAGCCATTGATCCGACAAATATGATGCCTCCTCCAAACCA
AGTGCCCGCTCCAGACCAGCCATTCCCACTGTCTGTGAAA
CGAGAGGAGTCTAAAATCCCTCGATCAGGCACAGAGCAGA
ACTGGGTCTATCCTTCTGAACAGATGTTCTGGAACGCCAT
GCTGAGGAAAGGGTGGCGTTGGAAGGATGACACCCTCGCT
CCTGAAGACATGTCTAATATAATCCAGATCCACAACCGTA
ACAACGATCAAGCCTGGCAGGAAATCCTGAAGTGGGAAGC
ACTACATGCCAGCGAATGTCCTTGCGGTCCATCTCTGAAG
AGATTCGGAGGAAAAGCCAAAGAGTTTTCTCCCAGAGCCA
GAATACGTCACTGGATGGG

OTTDART00000039149 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000039149|OTTDARG00000028661|ZDB-GENE-000607-78 hccsb|OTTDARP00000031324 hccs-002 LG_ CU104783.8 Danio rerio protein_coding KNOWN, 659 bp
GGCTGGTGTTCATCATGGGCGCATCCGTATCCAGTCTTGC
TCCCACTATTCGGGCAGAGTCTGTGATTTCCGCTCCTCAT
TTTGCCGGTGCTTCTCCTCCCCCCGGGTGTCCCATGCATC
AGGAGCCTCCCAAAATAGCAATAATTGATCATGTGTAATG
TAAACCCAGGCTCTCCGCCTCCTGAGTGCCCGATGCATCA
GGCTCAGACACCACCGGCTGCTCCTGTGCATCAGGAAAGA
GCTTACGAGTTTGTCGAATGTCCCATGAGGGCCAAAGAAG
GAGCCATTGATCCGACAAATATGATGCCTCCTCCAAACCA
AGTGCCCGCTCCAGACCAGCCATTCCCACTGTCTGTGAAA
CGAGAGGAGTCTAAAATCCCTCGATCAGGCACAGAGCAGA
ACTGGGTCTATCCTTCTGAACAGATGTTCTGGAACGCCAT
GCTGAGGAAAGGGTGGCGTTGGAAGGATGACACCCTCGCT
CCTGAAGACATGTCTAATATAATCCAGATCCACAACCGTA
ACAACGATCAAGCCTGGCAGGAAATCCTGAAGTGGGAAGC
ACTACATGCCAGCGAATGTCCTTGCGGTCCATCTCTGAAG
AGATTCGGAGGAAAAGCCAAAGAGTTTTCTCCCAGAGCCA
GAATACGTCACTGGATGGG

Related Transcripts

Transcripts related to hccsb

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	hccsb-202	Ensembl	659 nt
mRNA	hccsb-201 (1) Ensembl	Ensembl	2,058 nt	Select Tool
mRNA	hccsb-203 (1) Ensembl	Ensembl	2,250 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations