Transcript

zgc:153935-203

ID

ZDB-TSCRIPT-090929-19128

Name

zgc:153935-203 Nomenclature History

Previous Names

zgc:153935-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

zgc:153935 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142962 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000142962.3|gene_biotype:protein_coding|ENSDARG00000036888.9 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:25:27718094:27735227:-1
ATCGCTAAACTGTCAGCTGCTGATACAGGAGTCCTGGACC
CGCTACATATACCCTCCGCTTTGTAGGTGGCGGAAATGCA
CCATATAAGTTGGTCTGCCAACCACCATTAACCCCATAAG
AAGAAGAAGAAGAACACAAAGAAGAAGAGGAAGTTTTGCA
GTTTGCATTATTGATATTTTAATTAGCCAAAATGAGCAAC
TCACAACCTTACAGACGCTTTAGTGATGAAAATTACAAAA
ACTGGCTAAAAATAGCAGAGAGTCTTCACATACTGCGAAA
CAGCATGCAGGACTTTATTGAAAAGGAAACTGAAACTTAT
CACAAGGCTCTGCTAAACAAACAGCAGCTCAGTGGACAAC
GTTGTGAGCAAACCTGCAAAAATAATAAGTCTCTCTGCCA
ACTGTGTGAATATTGGAAGAATGAAATTGTGACCAATCAC
AATGAGGGTGGTAGAAATGTACACTGGGACAATTGCCGGC
CACATCTATGGGCCACAAATAAATGGGAAGTTGCAAAGGC
ATACATGCCACGTGGGCACAAACAGCATTGTGAGTTTGCC
CAGTTTGATATTTCTGCCATTCTTAACTTTCTGAGTGCCT
GTAAACATTTTAAGCCATTTTTGACTAAGGGGGAAAATGT
GAAAAAGGTTATAAATGTTCGGAATGTTGTGATGCACTCC
CCTGACCTTAAAATGAACAATGAGGATATGAACAGACACC
TTGAAACAATTTTCCAGT

OTTDART00000038778 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038778|OTTDARG00000028469|ZDB-GENE-061103-148 zgc:153935|OTTDARP00000031060 CH211-194B17.1-005 LG_ CR381620.11 Danio rerio protein_coding KNOWN, 738 bp
ATCGCTAAACTGTCAGCTGCTGATACAGGAGTCCTGGACC
CGCTACATATACCCTCCGCTTTGTAGGTGGCGGAAATGCA
CCATATAAGTTGGTCTGCCAACCACCATTAACCCCATAAG
AAGAAGAAGAAGAACACAAAGAAGAAGAGGAAGTTTTGCA
GTTTGCATTATTGATATTTTAATTAGCCAAAATGAGCAAC
TCACAACCTTACAGACGCTTTAGTGATGAAAATTACAAAA
ACTGGCTAAAAATAGCAGAGAGTCTTCACATACTGCGAAA
CAGCATGCAGGACTTTATTGAAAAGGAAACTGAAACTTAT
CACAAGGCTCTGCTAAACAAACAGCAGCTCAGTGGACAAC
GTTGTGAGCAAACCTGCAAAAATAATAAGTCTCTCTGCCA
ACTGTGTGAATATTGGAAGAATGAAATTGTGACCAATCAC
AATGAGGGTGGTAGAAATGTACACTGGGACAATTGCCGGC
CACATCTATGGGCCACAAATAAATGGGAAGTTGCAAAGGC
ATACATGCCACGTGGGCACAAACAGCATTGTGAGTTTGCC
CAGTTTGATATTTCTGCCATTCTTAACTTTCTGAGTGCCT
GTAAACATTTTAAGCCATTTTTGACTAAGGGGGAAAATGT
GAAAAAGGTTATAAATGTTCGGAATGTTGTGATGCACTCC
CCTGACCTTAAAATGAACAATGAGGATATGAACAGACACC
TTGAAACAATTTTCCAGT

Related Transcripts

Transcripts related to zgc:153935

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	zgc:153935-203	Ensembl	738 nt
mRNA	zgc:153935-201 (1) Ensembl	Ensembl	844 nt	Select Tool ZFIN BLAST
mRNA	zgc:153935-202 (1) Ensembl	Ensembl	2,275 nt	Select Tool ZFIN BLAST
mRNA	zgc:153935-205 (1) Ensembl	Ensembl	622 nt	Select Tool ZFIN BLAST
mRNA	zgc:153935-206 (1) Ensembl	Ensembl	2,178 nt	Select Tool ZFIN BLAST
ncRNA	zgc:153935-002 (1) Ensembl	Ensembl	533 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations