Transcript

smarcb1b-006

ID

ZDB-TSCRIPT-090929-18726

Name

smarcb1b-006 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

smarcb1b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142354 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000142354.2|gene_biotype:protein_coding|ENSDARG00000011594.10 transcript_biotype:retained_intron gene_symbol:smarcb1b cdna chromosome:GRCz11:21:15615419:15618607:1
AATAGCAAAAACCTAATGATACCAGACAGTGGTTTGTTTA
ACACACGCATGTGCTACCACAGCATGGCTTTAATGTCTGT
ATTATGTTTAGAAGCTTATAATATTCAGATTTATTTCAAT
TCTAAAATATATTGTTGTCTTTCAACACCTTTGTGCCTCC
ATGGTCATCATTGAAGCACCACTGGTCTTTCTTTATGTTG
AAAGAGATGCTGTACAAATCTAACTTCTTGTGGCTCCTAT
TTCCTGCAGTGAGAACCCGTTACCAACTGTAGAGATCGCC
ATTCGCAACACAGGAGATGCTGACCAGTGGTGCCCTCTGC
TGGAGACTCTGACAGATGCAGAGATGGAGAAGAAAATCAG
AGATCAGGACAGAAACACAAGGCGTATGCGACGACTTGCC
AACACGGCCCCTGCATGGTAAAGACAAGACGTGATTGGTG
CTGCCACTCAATAAGCTCACAGTCTCTTAAAGGGCCTCAG
GGTTGCTGGAGGCCTTTGCACAGATCCATACAGCTCTAGA
TAACATTCCTCCAGCCTTCAGGCCTCCTCAACCCACACAA
CGTTACATATTTTCTTAATATCAGGCCTTTAAACTCTGAT
CTGGCATCAGCCAGGCTTTACCAGCACTCTTCAAGGCTGT
TCGGG

OTTDART00000038336 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038336|OTTDARG00000028206|ZDB-GENE-991008-16 smarcb1b|no_translation smarcb1-006 LG_ CR936477.18 Danio rerio protein_coding KNOWN, 645 bp
AATAGCAAAAACCTAATGATACCAGACAGTGGTTTGTTTA
ACACACGCATGTGCTACCACAGCATGGCTTTAATGTCTGT
ATTATGTTTAGAAGCTTATAATATTCAGATTTATTTCAAT
TCTAAAATATATTGTTGTCTTTCAACACCTTTGTGCCTCC
ATGGTCATCATTGAAGCACCACTGGTCTTTCTTTATGTTG
AAAGAGATGCTGTACAAATCTAACTTCTTGTGGCTCCTAT
TTCCTGCAGTGAGAACCCGTTACCAACTGTAGAGATCGCC
ATTCGCAACACAGGAGATGCTGACCAGTGGTGCCCTCTGC
TGGAGACTCTGACAGATGCAGAGATGGAGAAGAAAATCAG
AGATCAGGACAGAAACACAAGGCGTATGCGACGACTTGCC
AACACGGCCCCTGCATGGTAAAGACAAGACGTGATTGGTG
CTGCCACTCAATAAGCTCACAGTCTCTTAAAGGGCCTCAG
GGTTGCTGGAGGCCTTTGCACAGATCCATACAGCTCTAGA
TAACATTCCTCCAGCCTTCAGGCCTCCTCAACCCACACAA
CGTTACATATTTTCTTAATATCAGGCCTTTAAACTCTGAT
CTGGCATCAGCCAGGCTTTACCAGCACTCTTCAAGGCTGT
TCGGG

Related Transcripts

Transcripts related to smarcb1b

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	smarcb1b-202 (1) Ensembl	Ensembl	831 nt	Select Tool ZFIN BLAST
mRNA	smarcb1b-203 (1) Ensembl	Ensembl	850 nt	Select Tool ZFIN BLAST
mRNA	smarcb1b-206 (1) Ensembl	Ensembl	1,547 nt	Select Tool ZFIN BLAST
mRNA	smarcb1b-207 (1) Ensembl	Ensembl	4,253 nt	Select Tool ZFIN BLAST
ncRNA	smarcb1b-003 (1) Ensembl	Ensembl	615 nt	Select Tool ZFIN BLAST
ncRNA	smarcb1b-005 (1) Ensembl	Ensembl	457 nt	Select Tool ZFIN BLAST
ncRNA	smarcb1b-006	Ensembl	645 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations