Transcript

tpgs2-204

ID

ZDB-TSCRIPT-090929-18676

Name

tpgs2-204 Nomenclature History

Previous Names

tpgs2-003
zgc:91821-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

tpgs2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142644 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000142644.3|gene_biotype:protein_coding|ENSDARG00000011926.9 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:21:12027968:12036074:-1
ATCGAATCAATGGCATAGAAGTATATAGATGCTTTTTATT
TGTTTTGGGGGGAATGGAGGAGGTAAAAGATGACAAGACG
TACAAGGGGTTTGTAGATAGACTCACCCTCGGCATCACTC
GAGTTCTGGAGAATCTCCCTGGTGTGCTGGATGTACGGTT
TGTAGAGAAAGCCCCTGCAGAAAAGAGATGCCTTCTCTCC
TGGGAGCAGGTATGGAGAAAAACAACTGCGCTTTGCCGGA
AGATCTCCGAGATTTTTATCTCACAACAGATGGCTTCATG
CTTGCCTGGAACTCCAAGTTGGAAAGTGAGCAGCTTAAAC
ATCACTTGAATATGGAAGATTGTCTCTGACACACACATAC
AGGCTAAAACTTTCTCATGATTCCAAATACATATAAGCAA
ATGAAGTGGTTCCAGTGGGTTGCATGATGATCAACAACGT
TGCTCAATTACGCCCTCTGATTCAGTCAAATGTATATTGC
CTCCCCAATGCACCAACCTTAGCTGATCTCGACTTTGACG
ATGACATAGACGGATCAGACGGCCCAGAAAAGCCTCATTT
TGATTTGCGCAGTCGCATCTTTGAGCTGGACTCCTGCAAT
GGTAATGGCAAAGTTTGCCTTGTTTACAAGAGCTGCTCTC
CAGGTGTAATGGCCCAGCAGTGTGAGGTGTGGTTCTTGGA
CCGATCACTTTTCTGGCACTATCTCACCCCCTCCTTCACT
GCCTACTACCGGCTTATGATCACTCATCTGGGGCTGCCAG
AGTGGCAATATAATTTCACTCCGTATGGCCCCAGCCCACA
AGCTA

OTTDART00000038286 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038286|OTTDARG00000028186|ZDB-GENE-040704-49 tpgs2|OTTDARP00000030679 CH211-260M19.6-003 LG_ CT027620.13 Danio rerio protein_coding KNOWN, 805 bp
ATCGAATCAATGGCATAGAAGTATATAGATGCTTTTTATT
TGTTTTGGGGGGAATGGAGGAGGTAAAAGATGACAAGACG
TACAAGGGGTTTGTAGATAGACTCACCCTCGGCATCACTC
GAGTTCTGGAGAATCTCCCTGGTGTGCTGGATGTACGGTT
TGTAGAGAAAGCCCCTGCAGAAAAGAGATGCCTTCTCTCC
TGGGAGCAGGTATGGAGAAAAACAACTGCGCTTTGCCGGA
AGATCTCCGAGATTTTTATCTCACAACAGATGGCTTCATG
CTTGCCTGGAACTCCAAGTTGGAAAGTGAGCAGCTTAAAC
ATCACTTGAATATGGAAGATTGTCTCTGACACACACATAC
AGGCTAAAACTTTCTCATGATTCCAAATACATATAAGCAA
ATGAAGTGGTTCCAGTGGGTTGCATGATGATCAACAACGT
TGCTCAATTACGCCCTCTGATTCAGTCAAATGTATATTGC
CTCCCCAATGCACCAACCTTAGCTGATCTCGACTTTGACG
ATGACATAGACGGATCAGACGGCCCAGAAAAGCCTCATTT
TGATTTGCGCAGTCGCATCTTTGAGCTGGACTCCTGCAAT
GGTAATGGCAAAGTTTGCCTTGTTTACAAGAGCTGCTCTC
CAGGTGTAATGGCCCAGCAGTGTGAGGTGTGGTTCTTGGA
CCGATCACTTTTCTGGCACTATCTCACCCCCTCCTTCACT
GCCTACTACCGGCTTATGATCACTCATCTGGGGCTGCCAG
AGTGGCAATATAATTTCACTCCGTATGGCCCCAGCCCACA
AGCTA

Related Transcripts

Transcripts related to tpgs2

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tpgs2-202 (1) Ensembl	Ensembl	770 nt	Select Tool ZFIN BLAST
aberrant processed transcript	tpgs2-204	Ensembl	805 nt
mRNA	tpgs2-201 (1) Ensembl	Ensembl	1,112 nt	Select Tool ZFIN BLAST
mRNA	tpgs2-203 (1) Ensembl	Ensembl	945 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations