Transcript

trpc4apb-201

ID
ZDB-TSCRIPT-090929-18549
Name
trpc4apb-201 Nomenclature History
Previous Names
  • trpc4apb-001
  • ottdart00000038158
Transcript Type
pseudogenic transcript
Annotation Status
variant
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000169180 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000169180.2|gene_biotype:polymorphic_pseudogene|ENSDARG00000020647.12 transcript_biotype:polymorphic_pseudogene gene_symbol:trpc4apb cdna chromosome:GRCz11:23:18759542:18777957:-1
CTCAACGTCACGACGTCAGAGGAACAGCAATGGCGACAAG
AGGCCCTGGGTTTTCTCGCACCCAAACAAGACGAGGAAAA
CCATGCAAAAACATCTTTCATAAAATTCGACAAGGCCAAG
TCACCGGCGAGGGGTTAACTAGAGGATCACAGGTTCCTGT
GGCTTTGTTGGAGGAGAGAGACAAAAGAGCTCAATGGCAG
GGGATTCCAGTGTTACTAAGAAGGCTTCATAAGAGCAGCC
ATCCTAACAGCGATCTCTCCAAGATTCACAGCATAGTCAT
GGAGCTGTCGTCATTACTGTCCATGGAGGCCATTTCATTT
GTCACAGAGGAGCGGAAGATGCCACAGGAGTCCATTTCGC
CTAATACATATACATTTGACTTGTTTGGAGGAGTTGATTT
GTTTATAGAGATTTTAATGCGGCCGACACTCACAATACAG
CAAAACACACCCACAATGAGTGATGATCTCATTAAGGATT
GTTTAAGTGTACTGTACAACTGCTGTATATGTACAGAGGG
CGTTACAAAAAGCCTTGCAGCGAGGGAGGATTTCGTTATG
TACCTGTTCACTCTCATGTCCAACAAAAAAGTTTTCCTAC
AAACTGCCACTCTTATAGAGGACATTCTGAGCGTACGAAA
GGAAATTATCCAGCTGGAAGAAATTCCCAATTTGGACAGT
CTGGTTCAGAGCTTCAACCAGCAACAGCTTGCCAACTTTT
GTCGGATCCTGTCAGTCACCATATCAGAGCCGGACGTGGG
TGTTGATGACAAGCACACTCTTCTAGCCCGCAGTACCCAG
CAAAAAAACAGCACATGTCCATCACACGCTGAGAACAACC
AGGTGGCTCTATTGAACATCCCAGGTTTCATTGAGCGCCT
TTGTAAACTCGCCACAAGGAAAGTTACGGAAGCGGCGGAT
GCCTCTGCCAGGCTGGAGCTGGAGGACTGGCACAGCTGGC
TTGACAATGCACTGGTGCTGGACACTCTCATGCAGCTGGC
AATAGAGGAGGCAGAGCAGAGCAGTACAGAGTCATCTGAT
GAGAGCTCTCTGTCCTCCAGTCCACTCAGACACAGACTGC
CTCAGTCTATGAAGATAGTGCACGAGATCATGTATAAAGT
GGAGGTTCTCTATGTGCTGTGTGTGCTGCTTATGGGCCGA
CAGCGAAATCAGGTTCACAGAATGTTGGCAGAGTTCAAGT
TAATTCCAGGACTCAATAACCTATTTGATAAGTTAATCTG
GAGGAAGCAGCCATTTGGTCATATTCTGCATCGGCAGAAC
CAGAGCTGTGACTGCAGTCCAGAGATCTCCTTCAAGATTC
AGTTCCTCAGGCTCCTGCAGAGCTTCAGTGATCATCACGA
GAATAAATATCTTCTACTAAGTGGACAGGAGCTGAATGAA
CTGAGTGACATCTATCTGAATGCTAACATCTTTGAAATGG
AAGCACTGAACAACACAGACAGGAATCTTGTGTGTGATGG
TAAAAAAGGTCTTCTTACACGGTTAATCTCAGTCATGAAG
AAGGAGCCAATTGACTCTTCATTCAGGTTTTGGCAGGCAA
GAGCAGTGGAGAGCTTTTTGAGAGGAACGCCATCATATGC
TGATCAAGTGTTTCTTCTCAGAAGAGGCTTATTAGAGCAC
ATTCTCTATTGCATCATTGACAGTGGCTGCAAGTCCCATG
ACGTTCTTCAGAGTTACTTTGACTTACTTGGTGAGCTCAT
GAAGTTCAACATCGATGCCTTCAAAAGATTTAACAAATAC
GTCACCACTGAGGAGAAGTTTCAGATGTTCCTGACTCAGA
TCAACAGCTCTCTGGTGGACTCCAACATGCTGGTGCGATG
TATCGTCTTGTCTTTGGACCGCTTCGAGAATGAGACTAAT
GACGTGAAAGTGGTTGAAGTGTTTTCAGAGTGCCGCCTCT
TGTCCTACATGGCTTAGGTGGAAAACAGGTTGCTCTTCCT
TTTTTACAACTGATCAGCATCATCAATGTACAAACCCTCA
CTCAGGAGAATGTGAGCTGTCTGAACACCAGTCTTGTGAT
TCTGATGCTGGCGAGGAGACGGGGCAAGCTGCCTCTGTAC
CTAAGCGCTCTGCGGGAGAAGGAGTATTCGGAGAAATACC
CCGGCTGCCTGCTCAACAACTTCCACAACCTGCTGCGCTT
CTGGCAGCACCACTACCTCAACAAAGACAAGGACAGCACC
TGCCTGGAGAATAGTTCTTGTATTCCCTTTACATACTGGA
AGGAGACCGTCTCAGTGCTGCTGGGGTCTGGTAGAAGCTC
TCGCTGTGCCATTGCCACCTATATCGATGAACCCTACAGA
GACCTGGACAGAGACTTCATGGAGCTTTCACTAGAGACTG
AGAGGACTCTCTTTACATCACAAACACATCCTGCCTGCGG
TTATAACAGCTAGTCCATTCAGATTCATTGCGGATTTGGT
GTGTGTGAAGTTATATTTCGAGAGTTTTGATCTGCTTGTG
TGTTTGTGTGTACAGGTTTATGTGGTTTACAGGGATACAA
AGTTGTATAATGACATGGGTATGACCTATTTGTACTCCTA
TTAAATAATGTCGCTGTAATGATAGCACCTTACTGGGACA
TACTTAATGTCCCTGTAATTTGAAAGTGCTTAAAATCCTA
CTTTACGGGGTCTGTTCCATTCAAAATTGTTCATGTTTCC
TGTGAGGGTTGGGTTTTGCGGTAGAGCCATACAATAAGGG
TTTTTTACTGTATAAAAGGCATTACGCCTATGGGGAGTCC
CTGGAAACCATGTATACAAGTGTGTGTGTTGGCTCAAAGT
ATTACACGTGAATTGAATGTGCTTGGGAATAAGTAATGCC
ACTTTTTAGTTGTGTGTGCAATGGCACTAGAGTCCGGGTG
TTTTCAGCTGGCGAATAGAGTTTTTACAGCTGCCTTGTTT
TTCTAGCGCTGGGTTTTCGCCTCCTCTGGGTTGAGTTTTC
AGTGAACTGTCATTAGTGGTCACTTGATGAGCAGGATCCT
GGAAATTGTCAGGAAGAGCCTCACTGCCCATTGTCCCTCA
CTGCAAAAAAAAAGTAAAATCAGGGACATCCTAATGTCTG
ATTGTTTGGTTGGCTTAGTTTACATACTGCCTGTATATTT
ATGTATATGTAGTTCTCACTTCAATTGTACTTTCAGCCTG
AAATCACAGTGACTACACAAAGTAACAAAAGAAAATAAAT
AATTTGTTTT

OTTDART00000038158 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000038158|OTTDARG00000028123|ZDB-GENE-000330-2 trpc4apb|OTTDARP00000030587 trpc4apb-001 LG_ CR847953.10 Danio rerio polymorphic_pseudogene KNOWN, 3210 bp
CTCAACGTCACGACGTCAGAGGAACAGCAATGGCGACAAG
AGGCCCTGGGTTTTCTCGCACCCAAACAAGACGAGGAAAA
CCATGCAAAAACATCTTTCATAAAATTCGACAAGGCCAAG
TCACCGGCGAGGGGTTAACTAGAGGATCACAGGTTCCTGT
GGCTTTGTTGGAGGAGAGAGACAAAAGAGCTCAATGGCAG
GGGATTCCAGTGTTACTAAGAAGGCTTCATAAGAGCAGCC
ATCCTAACAGCGATCTCTCCAAGATTCACAGCATAGTCAT
GGAGCTGTCGTCATTACTGTCCATGGAGGCCATTTCATTT
GTCACAGAGGAGCGGAAGATGCCACAGGAGTCCATTTCGC
CTAATACATATACATTTGACTTGTTTGGAGGAGTTGATTT
GTTTATAGAGATTTTAATGCGGCCGACACTCACAATACAG
CAAAACACACCCACAATGAGTGATGATCTCATTAAGGATT
GTTTAAGTGTACTGTACAACTGCTGTATATGTACAGAGGG
CGTTACAAAAAGCCTTGCAGCGAGGGAGGATTTCGTTATG
TACCTGTTCACTCTCATGTCCAACAAAAAAGTTTTCCTAC
AAACTGCCACTCTTATAGAGGACATTCTGAGCGTACGAAA
GGAAATTATCCAGCTGGAAGAAATTCCCAATTTGGACAGT
CTGGTTCAGAGCTTCAACCAGCAACAGCTTGCCAACTTTT
GTCGGATCCTGTCAGTCACCATATCAGAGCCGGACGTGGG
TGTTGATGACAAGCACACTCTTCTAGCCCGCAGTACCCAG
CAAAAAAACAGCACATGTCCATCACACGCTGAGAACAACC
AGGTGGCTCTATTGAACATCCCAGGTTTCATTGAGCGCCT
TTGTAAACTCGCCACAAGGAAAGTTACGGAAGCGGCGGAT
GCCTCTGCCAGGCTGGAGCTGGAGGACTGGCACAGCTGGC
TTGACAATGCACTGGTGCTGGACACTCTCATGCAGCTGGC
AATAGAGGAGGCAGAGCAGAGCAGTACAGAGTCATCTGAT
GAGAGCTCTCTGTCCTCCAGTCCACTCAGACACAGACTGC
CTCAGTCTATGAAGATAGTGCACGAGATCATGTATAAAGT
GGAGGTTCTCTATGTGCTGTGTGTGCTGCTTATGGGCCGA
CAGCGAAATCAGGTTCACAGAATGTTGGCAGAGTTCAAGT
TAATTCCAGGACTCAATAACCTATTTGATAAGTTAATCTG
GAGGAAGCAGCCATTTGGTCATATTCTGCATCGGCAGAAC
CAGAGCTGTGACTGCAGTCCAGAGATCTCCTTCAAGATTC
AGTTCCTCAGGCTCCTGCAGAGCTTCAGTGATCATCACGA
GAATAAATATCTTCTACTAAGTGGACAGGAGCTGAATGAA
CTGAGTGACATCTATCTGAATGCTAACATCTTTGAAATGG
AAGCACTGAACAACACAGACAGGAATCTTGTGTGTGATGG
TAAAAAAGGTCTTCTTACACGGTTAATCTCAGTCATGAAG
AAGGAGCCAATTGACTCTTCATTCAGGTTTTGGCAGGCAA
GAGCAGTGGAGAGCTTTTTGAGAGGAACGCCATCATATGC
TGATCAAGTGTTTCTTCTCAGAAGAGGCTTATTAGAGCAC
ATTCTCTATTGCATCATTGACAGTGGCTGCAAGTCCCATG
ACGTTCTTCAGAGTTACTTTGACTTACTTGGTGAGCTCAT
GAAGTTCAACATCGATGCCTTCAAAAGATTTAACAAATAC
GTCACCACTGAGGAGAAGTTTCAGATGTTCCTGACTCAGA
TCAACAGCTCTCTGGTGGACTCCAACATGCTGGTGCGATG
TATCGTCTTGTCTTTGGACCGCTTCGAGAATGAGACTAAT
GACGTGAAAGTGGTTGAAGTGTTTTCAGAGTGCCGCCTCT
TGTCCTACATGGCTTAGGTGGAAAACAGGTTGCTCTTCCT
TTTTTACAACTGATCAGCATCATCAATGTACAAACCCTCA
CTCAGGAGAATGTGAGCTGTCTGAACACCAGTCTTGTGAT
TCTGATGCTGGCGAGGAGACGGGGCAAGCTGCCTCTGTAC
CTAAGCGCTCTGCGGGAGAAGGAGTATTCGGAGAAATACC
CCGGCTGCCTGCTCAACAACTTCCACAACCTGCTGCGCTT
CTGGCAGCACCACTACCTCAACAAAGACAAGGACAGCACC
TGCCTGGAGAATAGTTCTTGTATTCCCTTTACATACTGGA
AGGAGACCGTCTCAGTGCTGCTGGGGTCTGGTAGAAGCTC
TCGCTGTGCCATTGCCACCTATATCGATGAACCCTACAGA
GACCTGGACAGAGACTTCATGGAGCTTTCACTAGAGACTG
AGAGGACTCTCTTTACATCACAAACACATCCTGCCTGCGG
TTATAACAGCTAGTCCATTCAGATTCATTGCGGATTTGGT
GTGTGTGAAGTTATATTTCGAGAGTTTTGATCTGCTTGTG
TGTTTGTGTGTACAGGTTTATGTGGTTTACAGGGATACAA
AGTTGTATAATGACATGGGTATGACCTATTTGTACTCCTA
TTAAATAATGTCGCTGTAATGATAGCACCTTACTGGGACA
TACTTAATGTCCCTGTAATTTGAAAGTGCTTAAAATCCTA
CTTTACGGGGTCTGTTCCATTCAAAATTGTTCATGTTTCC
TGTGAGGGTTGGGTTTTGCGGTAGAGCCATACAATAAGGG
TTTTTTACTGTATAAAAGGCATTACGCCTATGGGGAGTCC
CTGGAAACCATGTATACAAGTGTGTGTGTTGGCTCAAAGT
ATTACACGTGAATTGAATGTGCTTGGGAATAAGTAATGCC
ACTTTTTAGTTGTGTGTGCAATGGCACTAGAGTCCGGGTG
TTTTCAGCTGGCGAATAGAGTTTTTACAGCTGCCTTGTTT
TTCTAGCGCTGGGTTTTCGCCTCCTCTGGGTTGAGTTTTC
AGTGAACTGTCATTAGTGGTCACTTGATGAGCAGGATCCT
GGAAATTGTCAGGAAGAGCCTCACTGCCCATTGTCCCTCA
CTGCAAAAAAAAAGTAAAATCAGGGACATCCTAATGTCTG
ATTGTTTGGTTGGCTTAGTTTACATACTGCCTGTATATTT
ATGTATATGTAGTTCTCACTTCAATTGTACTTTCAGCCTG
AAATCACAGTGACTACACAAAGTAACAAAAGAAAATAAAT
AATTTGTTTT

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations