Transcript

atpaf2-005

ID

ZDB-TSCRIPT-090929-17213

Name

atpaf2-005 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

atpaf2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000134297 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000134297.2|gene_biotype:protein_coding|ENSDARG00000056270.6 transcript_biotype:retained_intron gene_symbol:atpaf2 cdna chromosome:GRCz11:12:18410611:18411753:-1
AAAGGACAAAAGAACAGATGATCTCTGCCGCTCTGAAGTT
TTTGGAAACAGACACTATCTGTTACAGAGTAGAAGAACCT
CCAGGCCTTGTGGAACTTCAGACAAATGAATGGGACCCTG
TGATGAACTGGATTGAACAAAGGTAAAATTGACAGATTTT
TGGTCAGAGTTTTGATTGTGTACTAATTACAAAAAGTTAC
AATTTACTGGTATATAAGAACGTACTGTTGTTTTTAGGTA
CAATGTAGTCATTGGCTCGTCCTCCAATATAATGGGCCCT
CAAATCCCAGAAGAGACTAAAGAGACATTTCATCAGCACC
TTAATTCCTTCAACTTCTGGTCTCTGACAGGGCTTGAGTT
TGTGATCAATCAGCTGAAGTCGCTGGTTTTGTCCTTTGCG
CTGATTGACAGACACCTAAATGTGGAAGAAGCGGTTCTGT
TGTCCAGACTTGAGGAAGAATACCAGATTCGGAGCTGGGG
AAATGTGGAGTGGGTCCATGATTATGACATGTATGAGCTG
AGAGCGCGAACGGCGGCTGGTGCATTGTTTGTGCATCTGT
CATCTGAAAAAACATCTGTGAAGAAAAAAATCTTACAAGA
CTGATAATGCCAAAAATAGACTGTGTGGGTCTGAAACTTT
GGGAATTGTTATCTGTTTTTGTTTTTACAGTGACACTAGT
TATCTAACCAGTAGTTATGTTTTGAGAAATAATACAGATT
TCTAAGGTCATGATATGTATTTATAGTGTCAACAGCTATC
ACATGGAAACACTGTAAATGCTAAAACCCAGTATTTCAAA
CTCAATTTCAAAGATGTAAATGTTTAAACTGTATGTTGGG
GAAAAGAAAGAAACATTTTAATAAATTACAAAGTACAAAC
ATC

OTTDART00000036767 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000036767|OTTDARG00000027364|ZDB-GENE-050411-18 atpaf2|no_translation atpaf2-005 LG_ AL844587.19 Danio rerio protein_coding KNOWN, 883 bp
AAAGGACAAAAGAACAGATGATCTCTGCCGCTCTGAAGTT
TTTGGAAACAGACACTATCTGTTACAGAGTAGAAGAACCT
CCAGGCCTTGTGGAACTTCAGACAAATGAATGGGACCCTG
TGATGAACTGGATTGAACAAAGGTAAAATTGACAGATTTT
TGGTCAGAGTTTTGATTGTGTACTAATTACAAAAAGTTAC
AATTTACTGGTATATAAGAACGTACTGTTGTTTTTAGGTA
CAATGTAGTCATTGGCTCGTCCTCCAATATAATGGGCCCT
CAAATCCCAGAAGAGACTAAAGAGACATTTCATCAGCACC
TTAATTCCTTCAACTTCTGGTCTCTGACAGGGCTTGAGTT
TGTGATCAATCAGCTGAAGTCGCTGGTTTTGTCCTTTGCG
CTGATTGACAGACACCTAAATGTGGAAGAAGCGGTTCTGT
TGTCCAGACTTGAGGAAGAATACCAGATTCGGAGCTGGGG
AAATGTGGAGTGGGTCCATGATTATGACATGTATGAGCTG
AGAGCGCGAACGGCGGCTGGTGCATTGTTTGTGCATCTGT
CATCTGAAAAAACATCTGTGAAGAAAAAAATCTTACAAGA
CTGATAATGCCAAAAATAGACTGTGTGGGTCTGAAACTTT
GGGAATTGTTATCTGTTTTTGTTTTTACAGTGACACTAGT
TATCTAACCAGTAGTTATGTTTTGAGAAATAATACAGATT
TCTAAGGTCATGATATGTATTTATAGTGTCAACAGCTATC
ACATGGAAACACTGTAAATGCTAAAACCCAGTATTTCAAA
CTCAATTTCAAAGATGTAAATGTTTAAACTGTATGTTGGG
GAAAAGAAAGAAACATTTTAATAAATTACAAAGTACAAAC
ATC

Related Transcripts

Transcripts related to atpaf2

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	atpaf2-201 (1) Ensembl	Ensembl	1,445 nt	Select Tool ZFIN BLAST
mRNA	atpaf2-202 (1) Ensembl	Ensembl	726 nt	Select Tool ZFIN BLAST
ncRNA	atpaf2-002 (1) Ensembl	Ensembl	996 nt	Select Tool ZFIN BLAST
ncRNA	atpaf2-004 (1) Ensembl	Ensembl	748 nt	Select Tool ZFIN BLAST
ncRNA	atpaf2-005	Ensembl	883 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations