Transcript

ccdc43-202

ID

ZDB-TSCRIPT-090929-16911

Name

ccdc43-202 Nomenclature History

Previous Names

ccdc43-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ccdc43 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000145148 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000145148.2|gene_biotype:protein_coding|ENSDARG00000054446.8 transcript_biotype:nonsense_mediated_decay gene_symbol:ccdc43 cdna chromosome:GRCz11:3:31600648:31603704:1
GAACAAATCGCCGGGGAGTTTGAAAACTGGCTGAATGAGC
GGCTGGACTCGCTTGAAGTTGACCGAGAAGTTTACGGAGC
TTATATACTTGGGGTGCTTCAGGAGGAGGAGAGCGATGAA
GAGCAAAAGGACGCTCTTCAAGGCATTCTGTCCGCTTTTC
TGGAAGAAGAGACGCTTGAGGAGGTTTGCCAAGAGATCTT
GAAACAGTGGACAGAGTGCTGTAGCAGATCTGCAGCAAAG
AGCGATCAGGCGGATGTGCTTTGCTTTGTTTTGTTTTAAG
CTGAAGTTCAGGCCATTGCTAGTCTGATAGAGAAGCAGGC
ACAGATTGTGGTCAAACAGAAGGAGGTGTCAGAAGATGCC
AAGAAGAGGAAAGAGGCTGTTCTTGCTCAATATGCCAATG
TCACAGACGACGAAGATGAAGCTGAAGAGGAGGAGCAAGT
CCCAGTGGGGATACCCAGTGACAAATCCCTGTTCAAAAAC
ACCAATGTGGAGGATGTTTTGAATCGCCGCAAACTGCAGC
GTGACCAGGCCAAGGAAGATGCACAGAAGAAGAAAGAGCA
GGACAAGATGCAACGTGAAAAAGACAAACTGTCCAAGCAG
GA

OTTDART00000036427 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000036427|OTTDARG00000027179|ZDB-GENE-040426-1587 ccdc43|OTTDARP00000029231 ccdc43-003 LG_ CU062431.6 Danio rerio protein_coding KNOWN, 602 bp
GAACAAATCGCCGGGGAGTTTGAAAACTGGCTGAATGAGC
GGCTGGACTCGCTTGAAGTTGACCGAGAAGTTTACGGAGC
TTATATACTTGGGGTGCTTCAGGAGGAGGAGAGCGATGAA
GAGCAAAAGGACGCTCTTCAAGGCATTCTGTCCGCTTTTC
TGGAAGAAGAGACGCTTGAGGAGGTTTGCCAAGAGATCTT
GAAACAGTGGACAGAGTGCTGTAGCAGATCTGCAGCAAAG
AGCGATCAGGCGGATGTGCTTTGCTTTGTTTTGTTTTAAG
CTGAAGTTCAGGCCATTGCTAGTCTGATAGAGAAGCAGGC
ACAGATTGTGGTCAAACAGAAGGAGGTGTCAGAAGATGCC
AAGAAGAGGAAAGAGGCTGTTCTTGCTCAATATGCCAATG
TCACAGACGACGAAGATGAAGCTGAAGAGGAGGAGCAAGT
CCCAGTGGGGATACCCAGTGACAAATCCCTGTTCAAAAAC
ACCAATGTGGAGGATGTTTTGAATCGCCGCAAACTGCAGC
GTGACCAGGCCAAGGAAGATGCACAGAAGAAGAAAGAGCA
GGACAAGATGCAACGTGAAAAAGACAAACTGTCCAAGCAG
GA

Related Transcripts

Transcripts related to ccdc43

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ccdc43-202	Ensembl	602 nt
mRNA	ccdc43-201 (1) Ensembl	Ensembl	2,260 nt	Select Tool ZFIN BLAST
mRNA	ccdc43-203 (1) Ensembl	Ensembl	985 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations