Transcript

zgc:154046-203

ID

ZDB-TSCRIPT-090929-16494

Name

zgc:154046-203 Nomenclature History

Previous Names

zgc:154046-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

zgc:154046 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139250 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000139250.2|gene_biotype:protein_coding|ENSDARG00000016545.10 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:8:44959287:44968031:1
ACAAGACAAATAAGGAGTCGGTACGGGCAATCCAGAAGAG
TATCTTCACAGTGTCTCTTGATGCTCCGATGCCACGTGTG
TCAGATGAGATGTACCATAATAAGGTTGCAGCTCAAATGC
TCCATGGTGGAGGCAGTCGCTGGAACAGTGGTAACCGTTG
GTTTGACAAAACTCTGCAGTTCATAGTTGGGGAGGACGGA
TCATGTGGACTCACCTATGAACATGCGCCAGCCGAGGGAC
CTCCTATTGTTTTCTTGGTGGATCATGTTGTTGACTATAT
CAGCATCCAAGAAAGGTATAGTCCTTTAGAAGCAAAGATG
GGCCGAGGATGACCAGTTTGCTAACAAATATGAAGAGAAC
TGAGATGGTGAGAACTCCCATGATTCCACTTCCTATGCCA
TTAAAGCTTCGATTTAACATCACGCCAGAAATCAAGAAGG
ACATTGAGAAAGCCAAACAGAACATGAACATCATGGTCCA
TGACCTAGATGTTCGAGTGCTCAACTTTTCACAATATGGA
AGAAAGTTCCCAAAGTCTCATAAACTGAGTCCTGATGCAT
TCATTCAAATGGCACTGCAGTTGGCATATTACAGGATGTA
TGAGACATGCTGTCCATCCTACGAGAGTGCATCTTTACGC
ATGTTTAAACTGGGCAGAACAGAAGCCATTCGATCCACCA
CCACAGAATCGTTGCAGTTCACAAAAGCCATGGATGATCC
ATCAAAAAATAATATTGAGAAAGCAGCACTGCTCAAAAAT
GCGATTAAAGTCCACAGAGAGCTCACATACATG

OTTDART00000035940 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000035940|OTTDARG00000026910|ZDB-GENE-061103-289 zgc:154046|OTTDARP00000028827 CH211-163B2.5-002 LG_ BX005065.10 Danio rerio protein_coding KNOWN, 793 bp
ACAAGACAAATAAGGAGTCGGTACGGGCAATCCAGAAGAG
TATCTTCACAGTGTCTCTTGATGCTCCGATGCCACGTGTG
TCAGATGAGATGTACCATAATAAGGTTGCAGCTCAAATGC
TCCATGGTGGAGGCAGTCGCTGGAACAGTGGTAACCGTTG
GTTTGACAAAACTCTGCAGTTCATAGTTGGGGAGGACGGA
TCATGTGGACTCACCTATGAACATGCGCCAGCCGAGGGAC
CTCCTATTGTTTTCTTGGTGGATCATGTTGTTGACTATAT
CAGCATCCAAGAAAGGTATAGTCCTTTAGAAGCAAAGATG
GGCCGAGGATGACCAGTTTGCTAACAAATATGAAGAGAAC
TGAGATGGTGAGAACTCCCATGATTCCACTTCCTATGCCA
TTAAAGCTTCGATTTAACATCACGCCAGAAATCAAGAAGG
ACATTGAGAAAGCCAAACAGAACATGAACATCATGGTCCA
TGACCTAGATGTTCGAGTGCTCAACTTTTCACAATATGGA
AGAAAGTTCCCAAAGTCTCATAAACTGAGTCCTGATGCAT
TCATTCAAATGGCACTGCAGTTGGCATATTACAGGATGTA
TGAGACATGCTGTCCATCCTACGAGAGTGCATCTTTACGC
ATGTTTAAACTGGGCAGAACAGAAGCCATTCGATCCACCA
CCACAGAATCGTTGCAGTTCACAAAAGCCATGGATGATCC
ATCAAAAAATAATATTGAGAAAGCAGCACTGCTCAAAAAT
GCGATTAAAGTCCACAGAGAGCTCACATACATG

Related Transcripts

Transcripts related to zgc:154046

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	zgc:154046-203	Ensembl	793 nt
mRNA	zgc:154046-201 (1) Ensembl	Ensembl	2,514 nt	Select Tool ZFIN BLAST
ncRNA	zgc:154046-003 (1) Ensembl	Ensembl	1,053 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations