Transcript

plod1a-203

ID

ZDB-TSCRIPT-090929-15623

Name

plod1a-203 Nomenclature History

Previous Names

plod1a-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

plod1a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000147159 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000147159.2|gene_biotype:protein_coding|ENSDARG00000059746.7 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:8:47850153:47855121:1
GTTACTGTAAACAGCTCTGAAGAATAACGGGTCCGAATAT
GAGAGGAGTTCTGGCTTTTCTCGCGTGTTTGTTTGCGTCT
TTTCCCCCGCTGCACTGTAATCAGCAGGGCTCGATCCCCG
AGGGTTTACGTGCTGTGAGAGTAAGCGAATATTCCAGATG
TGCACGGAGTTCCTGTCGGATCCTCAGATGATAGGAGTGG
GATGTGGGATCGCAACCCATTGGGATGAGCTCTTCCAGCA
CGTAGGCAGAGGAGCTGAGCAGCTGTGGAGAAGTTTGACG
TTTGTCTTTCTATAATATTAACACTGTTTTGTGTGTTTTC
AGGAGATCTTCTGGTGCTCACTGTAGCCACGCAGGAGACT
GATGGGTTCAGACGGTTTTTGAGATCTGCTAAACACTTCA
ATTACACCATCAAGGTTCTCGGACGAGGTGAAACATGGAG
AGGTGGAGATTACATGACAGCTCCAGGTGGAGGACAGAAA
GTGCGCCTGCTGAAATCTGCACTGGAGGACATCCAGGAAG
AGAAAAAAGTCATTCTTTTTGTGGATAGCTATGACGTGAT
TTTTTCGTCTGGTCCCAAAGAGCTGCTGAAGAAGTTTCAG
CAGGCCAAACACAAAGTAGTGTTCTCCGCCGAGACTCTGA
TCTGGCCGGACCGTCACCTAGAGG

OTTDART00000034928 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000034928|OTTDARG00000026335|ZDB-GENE-030131-3165 plod1a|OTTDARP00000028418 plod1a-002 LG_ BX548250.8 Danio rerio protein_coding KNOWN, 664 bp
GTTACTGTAAACAGCTCTGAAGAATAACGGGTCCGAATAT
GAGAGGAGTTCTGGCTTTTCTCGCGTGTTTGTTTGCGTCT
TTTCCCCCGCTGCACTGTAATCAGCAGGGCTCGATCCCCG
AGGGTTTACGTGCTGTGAGAGTAAGCGAATATTCCAGATG
TGCACGGAGTTCCTGTCGGATCCTCAGATGATAGGAGTGG
GATGTGGGATCGCAACCCATTGGGATGAGCTCTTCCAGCA
CGTAGGCAGAGGAGCTGAGCAGCTGTGGAGAAGTTTGACG
TTTGTCTTTCTATAATATTAACACTGTTTTGTGTGTTTTC
AGGAGATCTTCTGGTGCTCACTGTAGCCACGCAGGAGACT
GATGGGTTCAGACGGTTTTTGAGATCTGCTAAACACTTCA
ATTACACCATCAAGGTTCTCGGACGAGGTGAAACATGGAG
AGGTGGAGATTACATGACAGCTCCAGGTGGAGGACAGAAA
GTGCGCCTGCTGAAATCTGCACTGGAGGACATCCAGGAAG
AGAAAAAAGTCATTCTTTTTGTGGATAGCTATGACGTGAT
TTTTTCGTCTGGTCCCAAAGAGCTGCTGAAGAAGTTTCAG
CAGGCCAAACACAAAGTAGTGTTCTCCGCCGAGACTCTGA
TCTGGCCGGACCGTCACCTAGAGG

Related Transcripts

Transcripts related to plod1a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	plod1a-203	Ensembl	664 nt
mRNA	plod1a-201 (1) Ensembl	Ensembl	2,767 nt	Select Tool ZFIN BLAST
ncRNA	plod1a-003 (1) Ensembl	Ensembl	406 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations