Transcript

ftr53-202

ID

ZDB-TSCRIPT-090929-14853

Name

ftr53-202

Previous Names

ftr53-003
si:ch211-221b16.8-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

ftr53 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000033940 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000033940|OTTDARG00000025730|ZDB-GENE-030616-515 ftr53|OTTDARP00000027423 CH211-221B16.8-003 LG_ BX510646.5 Danio rerio protein_coding KNOWN, 2114 bp
CTCCTTCTCAATTTTTATTCAGTAAAATGGCTGAAGCTCG
AATTTTTCAGGATGAGTTCAATTGTCCGGTGTGTTTGGAT
TTACTTAACGATCCAGTGACCATTCCGTGTGGACACAGTT
ACTGTAAGAGCTGTATTACTGGCTGCTGGAATCAAGAGGA
TCAGAGGGGAGTCTACAGCTGCCCTCAGTGCAGACAGGCC
TACAGTCCAAGACCTACTTTAGGTAAAAACACCATTCTGG
GTGAAATGGTGGAGAAACTGAAGAAGATTAAACTTCCTGC
TGACTGTTATGCTGGCCCTGGAGAAGTGCAGTGTGACGTC
TGTACTGGAAGAAAATACAAAGCAGTGAAGTCCTGTATGG
CTTGTCTAAACTCTTACTGTCAAAGTCATCTTGAACAACA
TGAGGATTTATTTAGAGGAAAAAAACACAATTTGATGGAT
GCCACCACACAGCTACAGGGGATAGTCTGCCATAAACATG
AGAAGATCAAGGAGGTATTTTGCCGCACAGATAATAAGTG
TATTTGTGTGCTGTGCACAATGGATGAACATAAAAACCAC
AACACTGTATCAGCGGCAGCTCAGCGGGCAGAAGAACAGG
TATAAACACATGGCACTGGTGAAATAATGCACTTTTTTAT
TAAAAATGAAAAATACTGCATGTTCATCTTTTTTTCAGGA
ACACTGTTGTTTAAATTCAATTAATCTTTATTTCTATAGC
ACTTTTACAATGTAGATTGTGTCAAAGCAGCTTTACAAAG
ACGATTATAGTTAACTCAAATAGTGTCAGTCTAGTTTTCA
GTGTTGAAGTTCAGTTTAGTTCAGTTCAGTGTGGTGTAAT
ATTCACTGCTGAGAGTTCAAACACTGAAGAGCAAATCCTC
AGGGCACGACCATTTCTCCTAAGGCCAAACGTCCTGTGTA
GAGCTGCAGTCTAGGCGCAGGCTGGAGAAAGCTGGACATC
CATCATGGAGAAGCTGCAGACGAGAGAGGTCATCTGTTGG
TGTACAGGCTGTTCTTCAGGATCAATGCGAGGACTTGTCA
CTGGGGTCCTACAAGGATCAGTCTTATGCTCTCCACTCCT
CCATGACCACCACAGCAGCTGCTCAGGATACAGCCTGGTC
CAGGATTATGGAAACCTTGGAAATAATAAAAAAAGACCAA
CATTAGGGCAGATGCCGTTCAAATTATAAAGTCTTTTGGG
AAGTGTTCCCAGCTCCAGTTGCCCTAAATAATGCAGACTA
ACAATCTTTTAAGAGGATTTGGATTTCACAAGCATTTGTG
TTTTATGTGTATGCTAATGCAAAGAGATCTCCCTCAGATA
CTGGGATGCTGTTACTAATACTAACCACTGTTAGTGTGTT
AATGATATAAGTAAATTAATAGAGCTTGTAAAATAATCAC
TAATTTGTTCGTTATTAAATTCCTGAATAAATTAGTATAA
TGATTCTTATTGAATGACACTTGAAAAATAAATAAATATA
TTTAAAAGTTTGTAAGGAAAAACAAAAACGTTGAGCAAAA
AAGCTTAAGTACATCATGCTTTTATGATGCATTGTCTTGT
CAAGTATTTCTTATGTTTGCTGTTCATTTTTATTCCAAAG
AAACACTTAAAAGGCTTGAAAAGAAAGTTCCAGCAAAGAA
TCAAGCAGGGAGAAAAAGATCTTCAGAAGCTGAGGGATGC
TGTGAAGTCTTATAAGTGCTCTGCCCAGGCAGCAGTAAAC
TACACTGAGAAGATCTTTAATGAGCTGATAAGTTCCATTA
TGAGAAGGCGATCTGAGGTCACACTGCTAATCAGAGGTCA
GGAAAAGGCTGCAGTGGATCATGCTGAAACACTTATTTTT
CAAGTGAAGCAGGATACGGAGACTCTGAGGGAAAGTGACG
CTGAGCTGGAGAATCTTTCGCATGTACAAAATCACATTCA
TTTTCTCCAGGTAACATCTAATAACAGAACTTCTAATGAC
AAGATTTTCAGCTTTTAAAATGAGCAGCTTAAAGATTATG
TTGTCCTAAGCTTTGATAAGTGATGCAAATTGTTGTTTTT
ACAAATAATTAGTCAGATTCTCATTTAACCTCAGCCATAA
AAAGAGCAAATCAATAAAACTATTTTCAGAAAAA

Related Transcripts

Transcripts related to ftr53

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ftr53-202	Havana	2114 nt
mRNA	ftr53-201 (1) Ensembl	Ensembl	2108 nt	Select Tool ZFIN BLAST
mRNA	ftr53-203 (1) Ensembl	Havana	967 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ottdart00000002060 (1)	Havana	579 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations