Transcript

upf1-202

ID
ZDB-TSCRIPT-090929-13227
Name
upf1-202 Nomenclature History
Previous Names
  • upf1-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000162582 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000162582.2|gene_biotype:protein_coding|ENSDARG00000016302.12 transcript_biotype:protein_coding gene_symbol:upf1 cdna chromosome:GRCz11:2:56213694:56235043:1
CTGATCGCCTTAAGAAAGGCTTTGACTTCCAGTGGCCCCA
GCCTGATAAGCCCATGTTTTTCTACGTGACCCAGGGCCAG
GAGGAGATCGCCAGCTCCGGCACCTCATATCTCAACAGGA
CTGAGGCTGCTAATGTGGAGAAGATCACCACTCGTCTGCT
GAAGGCCGGAGCCAAACCTGACCAGATTGGCATCATCACG
CCGTATGAGGGCCAGCGCTCTTACCTGGTGCAGTACATGC
AGTTCAGCGGCTCATTGCACACCAAACTCTACCAGGAGGT
GGAGATCGCCAGTGTGGATGCATTTCAAGGCAGAGAGAAG
GACTTCATCATCCTGTCCTGTGTCAGAGCTAATGAACACC
AGGGCATCGGCTTCCTGAACGACCCGCGCCGTCTCAATGT
GGCACTCACCAGAGCCAGATATGGGGTGATCATTGTGGGC
AACCCTAAAGCTCTGTCCAAACAGCCCCTGTGGAACCACC
TGCTGAACTACTACAAGGAGCAGAAGGTGCTGGTGGAGGG
TCCTCTCAACAACCTGAGGGAGAGTCTCATGCAGTTCAGC
AAACCACGCAAACTGGTCAACACCATCAACCCTGGAGCCC
GCTTCATGAGTACCGCCATGTATGATGCAAGGGAGGCCAT
GATTCCTGGATCTGTGTATGATCGCAGCAGCACTGGACGT
CCATCTAATATGTACTTCCAGACTCATGATCAGGTGGGCA
TGATCGGGACGGGCCCAAATCCGATGGGCTCTTTGAACAT
CCCCATCCCATTCAATCTGGTCATGCCGCCGATGCCTCCG
CCTGGGTATCTGGGACAGGTGAACGGACCTGCTGCAGGTC
GTGGTGCTCCTAAAGGTAAGACCGGGGGTCGTGGAGGTCG
ACAGAGGAACCGTGGCACTGGGAATCATGGCAGCGGGCAG
CCGAACATGCCCAACAGTCAGGCCAGCCAGGACCTGGTGT
CTCAGCCCTTCTCTCAGGGTCCGCTGACCCAGGGCTATAT
CACCATGAGCCAGCCTTCACAGATGAGCCAGCCGGGCCTG
TCCCAGCCGGAGCTCTCACAGGACAGCTACCTGGGTGATG
AGTTCAAGTCTCAGATGGATGTTGCGCTGTCCCAGGACTC
CACCTACCAGGGCGAACGGGCATATCAACACGGAGGAGTG
ACTGGACTCTCACAGTACTAGAGTGTTGTTGGAACAGGAG
CTAGGCCTGTGCTGAGCTTAGTTCATCAGCATTTTAAATA
TGGGTAAATACAAAAAAAGAACAAACATGGATGCCCGTTT
ACCACTGTTACAACTGAAGCACCATGGTGTGAGAGCAACA
GGAGAGAATCAAACCAATCACAGGAGGGAGTAAAGCTGGA
CAGGACGAAAGAGAAAGGCGTGAGCGGCCGAAAAACATCC
ACCATTGGTGGAGGAGAGGGGGAGACGCAGTGTTCGGAGG
AGACCAAACACGAGATCTTCCATCTGCAGCGGTGGAGGAG
GAGGGCGGCTCCTGGAGCGCAGGTATGGGTCTGTCCCGTC
CCGTCCCATCCCGGCCTCTTCTCTCTCTCTCGTCAGCCTC
AGGCCTGCCCTGCCAACCGAGACGGAGCCAAGATGATGAA
GTTCTCTTAAAACTACCTGCAAAAAAAAACACGCTTGCTC
TGTCGTCTCCGCGAGCTGAGAGAGGGGGTGACGTATTTAA
AGACACAAAGTAATTATAAACGCTTATCAAGCAGCTGATT
TTTTGGGAAAATATAAGAGTCGCCCCTCAAAGTTGACATC
CGACGTTCAGGTTCTGCCACCGAACATGAGAGAATGGACG
AGAGCTTCGCCTTTCATTTGGATTTTTCTTTTTTGCGTGC
GCGCCGGGTCTCCTAGAAGGTGCTAGGACACTCTGAAGGA
CGATTCAACTTTGAGGACGTCGTAACGGAGAGCCACTTAC
GGCGGGTGACTCGCAAAAATAATGGGGGTAGTGAAATAAA
AATGGCTTTCTCTTTTCATTTTAAATGTTTCGTCTCCGCA
AGGGGGCCGACAAGATCTATCCTTTCCTCTTTTAAAATAT
GGTTTTTGTTCAACTAGAATAAAAGCAGTGAACCGCTTGA
TTTAGACGTGGCTTTTAATATCTTGCTGCAAGCAGACGAT
ATGTAATAATAAATGAATCAATCAGGGTGGAATCATCGTA
TGAGAAGGATGTGTCAATCACTGTAGGAAGCCCCGCCCAC
TGCTGTTTGCGTCCAATCAGGACGCAGTGGTGTTCTTTAC
ATGGCAGAAAGCAGGAGATGGCCGCACCTATGCGAAGGAC
AGACAGGTGAGATTCTCGCTGTTTTTGCGTCTGACTGTAG
GAGGCGCTGTTGCGTCTTTTTGCATCACGATGATGTCAGT
GAGAGCGGCGTTTAATACGCCGACCAGAGCTGTGTGTGTG
TGAGAGTGTGTGTGTACGTTTGTGACTGCCCTCCCTCATC
ATTATTATTATTATTTGTGTTGTGGTAGTTGTAGTTTTCT
TTTTTTCCCCTCGTTCTAGTTGCTCATTTGCATTTTTTCC
TCCCTTAGTAGCTCATTTTTATTTGTACGATCTGACGTGA
AGTTCTCGTAACCTCTCTCAGTGTGGAAATTGCTCTTCTT
TGGTTTTGACGGACCCATTCGGAGTTTTATGGCAGCTTTT
AACATCTGTTCCGACCGATGCCAGTCGCCTCAACTTTATA
CTTTTACTTTTGGAGTGTTTATACCTTGCTGTTACTCCAT
ACGCGCAACACTTTTTGACTGTTTAATATTACTGAAGTAC
CACCGCTCGCATTTTATAGCATCGAGCACAATTTTTTTTT
GGTTTTTCGTTCTCGACCCACAAGACAATCATGATCCGCT
TCTCCACAGTTCCCGAGCATGTCAGTGTCTAATATTCTGA
CTTTTCACACTTTCCAATACTTGGGTTTCCATATTTCCCT
CTTCAGATGTAAATATCAGACTTGATAACATCAGCCAAAT
TGTTGTCAATGACAATGCATTCACGATAAAGCCACGGCGA
TCCTCATTCTGGTTCTTCTTATGATCGAGTTTATGACTCC
GAGATCACCCTTGTGTGAGTTTCTGCTGAGAAAGTTGCAT
CGGATTTGACTGAAATGTACAATAAATGAATGTAGTTTAC
CTTGCATTGAAGAGGAATGAGGGAAAAAAAAGCATCAGGA
TATGAAGTATAATTCAGGATTTTGCTTTGTGAAAAAGTTT
TCACCCCCCACGGTATGTACTTCTTGTAACGTTAAAAATA
AATGTTGCTTTCTTTCACCC

OTTDART00000031331 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000031331|OTTDARG00000023966|ZDB-GENE-040426-2836 upf1|OTTDARP00000048025 upf1-001 LG_ CU693375.12 Danio rerio protein_coding KNOWN, 3260 bp
CTGATCGCCTTAAGAAAGGCTTTGACTTCCAGTGGCCCCA
GCCTGATAAGCCCATGTTTTTCTACGTGACCCAGGGCCAG
GAGGAGATCGCCAGCTCCGGCACCTCATATCTCAACAGGA
CTGAGGCTGCTAATGTGGAGAAGATCACCACTCGTCTGCT
GAAGGCCGGAGCCAAACCTGACCAGATTGGCATCATCACG
CCGTATGAGGGCCAGCGCTCTTACCTGGTGCAGTACATGC
AGTTCAGCGGCTCATTGCACACCAAACTCTACCAGGAGGT
GGAGATCGCCAGTGTGGATGCATTTCAAGGCAGAGAGAAG
GACTTCATCATCCTGTCCTGTGTCAGAGCTAATGAACACC
AGGGCATCGGCTTCCTGAACGACCCGCGCCGTCTCAATGT
GGCACTCACCAGAGCCAGATATGGGGTGATCATTGTGGGC
AACCCTAAAGCTCTGTCCAAACAGCCCCTGTGGAACCACC
TGCTGAACTACTACAAGGAGCAGAAGGTGCTGGTGGAGGG
TCCTCTCAACAACCTGAGGGAGAGTCTCATGCAGTTCAGC
AAACCACGCAAACTGGTCAACACCATCAACCCTGGAGCCC
GCTTCATGAGTACCGCCATGTATGATGCAAGGGAGGCCAT
GATTCCTGGATCTGTGTATGATCGCAGCAGCACTGGACGT
CCATCTAATATGTACTTCCAGACTCATGATCAGGTGGGCA
TGATCGGGACGGGCCCAAATCCGATGGGCTCTTTGAACAT
CCCCATCCCATTCAATCTGGTCATGCCGCCGATGCCTCCG
CCTGGGTATCTGGGACAGGTGAACGGACCTGCTGCAGGTC
GTGGTGCTCCTAAAGGTAAGACCGGGGGTCGTGGAGGTCG
ACAGAGGAACCGTGGCACTGGGAATCATGGCAGCGGGCAG
CCGAACATGCCCAACAGTCAGGCCAGCCAGGACCTGGTGT
CTCAGCCCTTCTCTCAGGGTCCGCTGACCCAGGGCTATAT
CACCATGAGCCAGCCTTCACAGATGAGCCAGCCGGGCCTG
TCCCAGCCGGAGCTCTCACAGGACAGCTACCTGGGTGATG
AGTTCAAGTCTCAGATGGATGTTGCGCTGTCCCAGGACTC
CACCTACCAGGGCGAACGGGCATATCAACACGGAGGAGTG
ACTGGACTCTCACAGTACTAGAGTGTTGTTGGAACAGGAG
CTAGGCCTGTGCTGAGCTTAGTTCATCAGCATTTTAAATA
TGGGTAAATACAAAAAAAGAACAAACATGGATGCCCGTTT
ACCACTGTTACAACTGAAGCACCATGGTGTGAGAGCAACA
GGAGAGAATCAAACCAATCACAGGAGGGAGTAAAGCTGGA
CAGGACGAAAGAGAAAGGCGTGAGCGGCCGAAAAACATCC
ACCATTGGTGGAGGAGAGGGGGAGACGCAGTGTTCGGAGG
AGACCAAACACGAGATCTTCCATCTGCAGCGGTGGAGGAG
GAGGGCGGCTCCTGGAGCGCAGGTATGGGTCTGTCCCGTC
CCGTCCCATCCCGGCCTCTTCTCTCTCTCTCGTCAGCCTC
AGGCCTGCCCTGCCAACCGAGACGGAGCCAAGATGATGAA
GTTCTCTTAAAACTACCTGCAAAAAAAAACACGCTTGCTC
TGTCGTCTCCGCGAGCTGAGAGAGGGGGTGACGTATTTAA
AGACACAAAGTAATTATAAACGCTTATCAAGCAGCTGATT
TTTTGGGAAAATATAAGAGTCGCCCCTCAAAGTTGACATC
CGACGTTCAGGTTCTGCCACCGAACATGAGAGAATGGACG
AGAGCTTCGCCTTTCATTTGGATTTTTCTTTTTTGCGTGC
GCGCCGGGTCTCCTAGAAGGTGCTAGGACACTCTGAAGGA
CGATTCAACTTTGAGGACGTCGTAACGGAGAGCCACTTAC
GGCGGGTGACTCGCAAAAATAATGGGGGTAGTGAAATAAA
AATGGCTTTCTCTTTTCATTTTAAATGTTTCGTCTCCGCA
AGGGGGCCGACAAGATCTATCCTTTCCTCTTTTAAAATAT
GGTTTTTGTTCAACTAGAATAAAAGCAGTGAACCGCTTGA
TTTAGACGTGGCTTTTAATATCTTGCTGCAAGCAGACGAT
ATGTAATAATAAATGAATCAATCAGGGTGGAATCATCGTA
TGAGAAGGATGTGTCAATCACTGTAGGAAGCCCCGCCCAC
TGCTGTTTGCGTCCAATCAGGACGCAGTGGTGTTCTTTAC
ATGGCAGAAAGCAGGAGATGGCCGCACCTATGCGAAGGAC
AGACAGGTGAGATTCTCGCTGTTTTTGCGTCTGACTGTAG
GAGGCGCTGTTGCGTCTTTTTGCATCACGATGATGTCAGT
GAGAGCGGCGTTTAATACGCCGACCAGAGCTGTGTGTGTG
TGAGAGTGTGTGTGTACGTTTGTGACTGCCCTCCCTCATC
ATTATTATTATTATTTGTGTTGTGGTAGTTGTAGTTTTCT
TTTTTTCCCCTCGTTCTAGTTGCTCATTTGCATTTTTTCC
TCCCTTAGTAGCTCATTTTTATTTGTACGATCTGACGTGA
AGTTCTCGTAACCTCTCTCAGTGTGGAAATTGCTCTTCTT
TGGTTTTGACGGACCCATTCGGAGTTTTATGGCAGCTTTT
AACATCTGTTCCGACCGATGCCAGTCGCCTCAACTTTATA
CTTTTACTTTTGGAGTGTTTATACCTTGCTGTTACTCCAT
ACGCGCAACACTTTTTGACTGTTTAATATTACTGAAGTAC
CACCGCTCGCATTTTATAGCATCGAGCACAATTTTTTTTT
GGTTTTTCGTTCTCGACCCACAAGACAATCATGATCCGCT
TCTCCACAGTTCCCGAGCATGTCAGTGTCTAATATTCTGA
CTTTTCACACTTTCCAATACTTGGGTTTCCATATTTCCCT
CTTCAGATGTAAATATCAGACTTGATAACATCAGCCAAAT
TGTTGTCAATGACAATGCATTCACGATAAAGCCACGGCGA
TCCTCATTCTGGTTCTTCTTATGATCGAGTTTATGACTCC
GAGATCACCCTTGTGTGAGTTTCTGCTGAGAAAGTTGCAT
CGGATTTGACTGAAATGTACAATAAATGAATGTAGTTTAC
CTTGCATTGAAGAGGAATGAGGGAAAAAAAAGCATCAGGA
TATGAAGTATAATTCAGGATTTTGCTTTGTGAAAAAGTTT
TCACCCCCCACGGTATGTACTTCTTGTAACGTTAAAAATA
AATGTTGCTTTCTTTCACCC

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations