Transcript

ottdart00000030303

ID

ZDB-TSCRIPT-090929-12540

Name

ottdart00000030303 Nomenclature History

Previous Names

spata18-002
spata18-003

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

spata18 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000137594 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000137594.3|gene_biotype:protein_coding|ENSDARG00000052343.8 transcript_biotype:processed_transcript cdna chromosome:GRCz11:20:23161049:23163574:-1
AGGAACAGTGTTAAGCACACCTGGGATAAACCAATTCATA
AGTCCTCATAATTAATTTTTTAAAATCTCTTTCTGAATTA
TTTGGATGAACGAGAAGAAAAGATAGTGAAAGTCAAATAT
GAAAGTGGGTAAAGAAATAAAGAAAGTACCGGCGCAGTTT
TGACTCTGAGTTCACGGCTCCACTGGTGGCATTTCACGTG
TGGCCTGCGCTGCTGGAGGGAGACACTGTCATACTGAAGG
GAGAAGCGGTCACTAGGAGAGGAGCTCTGTGGAAAAGCCG
GAGTCGTAGCTCCAGTCCTGTTCGCTCTCGCTCAGGAAGC
CCCAGCCGCACATTTATGGCCAGTCATAGTCGGAGCCCCT
CTCCTGGACGTCTCTCAAGCAGTCGACTTTGAAACCTGAC
CTCACTTCACACCAGATGCAGGACCAAACAAAAGCAGATT
GATCAAAACATTTCTCTTTTTTTCAACTTGAACGTTTTTT
TAAATGTGTGGGATGAATTAGAAACAAAAGCAGTTACATT
TAAAAGTAACTTCTGAATAGACATTATTAAAGTTTTAAAC
AGTAAGCACTATTTACAAGTGTAAAAAACACCTGAGTGAA
CTACACTTAATAGGGGCCATTGGACTGGATAGGTAAACCT
TAATTGTATCAGATCATAGATATATACACATGTACACTGT
ATATCTATGGTATCAGATCAGCATAATGGCTCAAAGTTAA
GAGAACAGCTCTCTTAACGTTGACATTTTACTCAGTTATT
AACATCAATCACAATTACTTCACAGTTCAAATGTTTGAGG
CCTGTGATATATAATATTGAATAACTTTTTTTATTTCAAC
ACTAATATAGTGAGCAGACATTTTTTCAAATAAATAAAAT
GTACTGACACCAAACATTTGAACAGTGTATGTGATTGGGA
GAAATGGTGCTTGATAAAAGGTGCTCTGTTTGTCTATGAT
AACTGGACAAGTCTTT

OTTDART00000030303 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000030303|OTTDARG00000023284|ZDB-GENE-050522-306 spata18|no_translation spata18-002 LG_none CT827859.6,CT583700.5 Danio rerio protein_coding KNOWN, 976 bp
AGGAACAGTGTTAAGCACACCTGGGATAAACCAATTCATA
AGTCCTCATAATTAATTTTTTAAAATCTCTTTCTGAATTA
TTTGGATGAACGAGAAGAAAAGATAGTGAAAGTCAAATAT
GAAAGTGGGTAAAGAAATAAAGAAAGTACCGGCGCAGTTT
TGACTCTGAGTTCACGGCTCCACTGGTGGCATTTCACGTG
TGGCCTGCGCTGCTGGAGGGAGACACTGTCATACTGAAGG
GAGAAGCGGTCACTAGGAGAGGAGCTCTGTGGAAAAGCCG
GAGTCGTAGCTCCAGTCCTGTTCGCTCTCGCTCAGGAAGC
CCCAGCCGCACATTTATGGCCAGTCATAGTCGGAGCCCCT
CTCCTGGACGTCTCTCAAGCAGTCGACTTTGAAACCTGAC
CTCACTTCACACCAGATGCAGGACCAAACAAAAGCAGATT
GATCAAAACATTTCTCTTTTTTTCAACTTGAACGTTTTTT
TAAATGTGTGGGATGAATTAGAAACAAAAGCAGTTACATT
TAAAAGTAACTTCTGAATAGACATTATTAAAGTTTTAAAC
AGTAAGCACTATTTACAAGTGTAAAAAACACCTGAGTGAA
CTACACTTAATAGGGGCCATTGGACTGGATAGGTAAACCT
TAATTGTATCAGATCATAGATATATACACATGTACACTGT
ATATCTATGGTATCAGATCAGCATAATGGCTCAAAGTTAA
GAGAACAGCTCTCTTAACGTTGACATTTTACTCAGTTATT
AACATCAATCACAATTACTTCACAGTTCAAATGTTTGAGG
CCTGTGATATATAATATTGAATAACTTTTTTTATTTCAAC
ACTAATATAGTGAGCAGACATTTTTTCAAATAAATAAAAT
GTACTGACACCAAACATTTGAACAGTGTATGTGATTGGGA
GAAATGGTGCTTGATAAAAGGTGCTCTGTTTGTCTATGAT
AACTGGACAAGTCTTT

Related Transcripts

Transcripts related to spata18

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	spata18-201 (1) Ensembl	Ensembl	2,870 nt	Select Tool ZFIN BLAST
ncRNA	ottdart00000030303	Ensembl	976 nt
ncRNA	spata18-003 (1) Ensembl	Ensembl	856 nt	Select Tool ZFIN BLAST
ncRNA	spata18-004 (1) Ensembl	Ensembl	598 nt	Select Tool ZFIN BLAST
ncRNA	spata18-005 (1) Ensembl	Ensembl	535 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations