Transcript

clta-005

ID

ZDB-TSCRIPT-090929-10066

Name

clta-005 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

clta (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142900 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000142900.3|gene_biotype:protein_coding|ENSDARG00000045618.6 transcript_biotype:retained_intron gene_symbol:clta cdna chromosome:GRCz11:1:12348237:12355565:1
CTGACATTGGAGCCGTCGACGAGGAAGACAGTAGGGTGAT
TAGTGTTTTCGGTTGTTCTCCCTCTGAGCACATTCAGCAA
GCCATGGACGATTTCGATATGCTCAGTGCCCCTCAAGGAA
GCGCAGGGAACGGTGTCGGGGCAGACGAGGACCCGGCGGC
GGCATTTCTGGCCCAGCAAGAGAGCGAGATCGCTGGCATC
GAGAATGACGAGGGCTTCAGCATCCTGGACAGCGGAGATG
TGCCTTCGTCCCTGAGCCAAGACCAGGACGGTGGAGCAAT
GAATGGAGATCTGCATGGGGAGAGTAATGGCCCTTCAGAT
GTGTACGCGGCCATCTCCAGTGTGGATCGGTTGCAGGCTG
AGCCGGAGAGCTTGAGGAAGTGGAGAGAGGAGCAGCGAGA
TAGGCTGGAGGAGCTCGATGCGAACTCGCGTAAACAGGAG
GCCGAGTGGAAAGAGAAGGCAAAGCTGGAGCTGGAGGAAT
GGCACACCAGGCAGAACGAGCAGCTGGAGAAAACCAAAGT
CAACAACAGGTACAAAACACTGTTCGAGCAGAAGAAATCA
ACAAGGCAGGCCTAGTTTCTGGCTTTTGCTGTGCGATTAC
AAGAGCACAAGACCTGCACAGTTTAGTTTCAACCCTGCTT
CAATACACTTACCCAGAGGTGTAAAACAAGCCTCAAGGAC
TCCATTAGTTTGATTAAGTGTGCTTAATAAGGGTCAAAGC
TAAACTATGTAGAGCTAAGGACCTCCACAAACTGAGTTTG
ACACCTGTGCACTAGACAGTGCATGGCTCCCTTTATTACT
CCATTTGTATATTAAAAAAAAGTTTTACACAGCATTAAAA

OTTDART00000027512 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000027512|OTTDARG00000021585|ZDB-GENE-040426-1986 clta|no_translation clta-005 LG_ CT033816.7 Danio rerio protein_coding KNOWN, 840 bp
CTGACATTGGAGCCGTCGACGAGGAAGACAGTAGGGTGAT
TAGTGTTTTCGGTTGTTCTCCCTCTGAGCACATTCAGCAA
GCCATGGACGATTTCGATATGCTCAGTGCCCCTCAAGGAA
GCGCAGGGAACGGTGTCGGGGCAGACGAGGACCCGGCGGC
GGCATTTCTGGCCCAGCAAGAGAGCGAGATCGCTGGCATC
GAGAATGACGAGGGCTTCAGCATCCTGGACAGCGGAGATG
TGCCTTCGTCCCTGAGCCAAGACCAGGACGGTGGAGCAAT
GAATGGAGATCTGCATGGGGAGAGTAATGGCCCTTCAGAT
GTGTACGCGGCCATCTCCAGTGTGGATCGGTTGCAGGCTG
AGCCGGAGAGCTTGAGGAAGTGGAGAGAGGAGCAGCGAGA
TAGGCTGGAGGAGCTCGATGCGAACTCGCGTAAACAGGAG
GCCGAGTGGAAAGAGAAGGCAAAGCTGGAGCTGGAGGAAT
GGCACACCAGGCAGAACGAGCAGCTGGAGAAAACCAAAGT
CAACAACAGGTACAAAACACTGTTCGAGCAGAAGAAATCA
ACAAGGCAGGCCTAGTTTCTGGCTTTTGCTGTGCGATTAC
AAGAGCACAAGACCTGCACAGTTTAGTTTCAACCCTGCTT
CAATACACTTACCCAGAGGTGTAAAACAAGCCTCAAGGAC
TCCATTAGTTTGATTAAGTGTGCTTAATAAGGGTCAAAGC
TAAACTATGTAGAGCTAAGGACCTCCACAAACTGAGTTTG
ACACCTGTGCACTAGACAGTGCATGGCTCCCTTTATTACT
CCATTTGTATATTAAAAAAAAGTTTTACACAGCATTAAAA

Related Transcripts

Transcripts related to clta

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	clta-201 (1) Ensembl	Ensembl	1,338 nt	Select Tool ZFIN BLAST
mRNA	clta-203 (1) Ensembl	Ensembl	992 nt	Select Tool ZFIN BLAST
mRNA	clta-206 (1) Ensembl	Ensembl	754 nt	Select Tool ZFIN BLAST
ncRNA	clta-004 (1) Ensembl	Ensembl	806 nt	Select Tool ZFIN BLAST
ncRNA	clta-005	Ensembl	840 nt
ncRNA	clta-006 (1) Ensembl	Ensembl	883 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations