PUBLICATION

Cell Lineage Tracing in Zebrafish Embryos with an Expanded Genetic Code

Authors
Brown, W., Liu, J., Tsang, M., Deiters, A.
ID
ZDB-PUB-180428-5
Date
2018
Source
Chembiochem : a European journal of chemical biology   19(12): 1244-1249 (Other)
Registered Authors
Tsang, Michael
Keywords
DNA recombination, lineage tracing, optogenetics, unnatural amino acid, zebrafish
MeSH Terms
  • Animals
  • Cell Lineage*
  • Cell Tracking/methods*
  • Genetic Code*
  • Integrases/chemistry
  • Integrases/genetics
  • Models, Molecular
  • Optogenetics/methods*
  • Recombination, Genetic*
  • Zebrafish/embryology*
  • Zebrafish/genetics*
PubMed
29701891 Full text @ Chembiochem
Abstract
Cell lineage tracing is used to study embryo development, stem cell differentiation, and to document tumor cell heterogeneity. Cre recombinase-mediated cell labelling is the preferred approach; however, its utility is restricted by when and where DNA recombination takes place. We generated a photoactivatable Cre recombinase by replacing a critical residue in its active site with a photocaged lysine derivative through genetic code expansion in zebrafish embryos. This allows for high spatiotemporal control of DNA recombination using 405 nm light. Importantly, no background activity is seen before irradiation, and after light-triggered removal of the caging group, Cre recombinase activity is restored. We demonstrate the utility of this tool as a cell lineage tracer through activation in different regions and at different time-points in the early embryo. Direct control of Cre recombinase with light will allow for more precise DNA recombination for more nuanced studies of metazoan development and disease.
Genes / Markers
Figures
Show all Figures
Expression
Phenotype
Mutation and Transgenics
Human Disease / Model Data
Sequence Targeting Reagents
Fish
Antibodies
Orthology
Engineered Foreign Genes
Mapping
Errata and Notes