PUBLICATION

Fluorescent-Based Methods for Gene Knockdown and Functional Cardiac Imaging in Zebrafish

Authors
Umemoto, N., Nishimura, Y., Shimada, Y., Yamanaka, Y., Kishi, S., Ito, S., Okamori, K., Nakamura, Y., Kuroyanagi, J., Zhang, Z., Zang, L., Wang, Z., Nishimura, N., and Tanaka, T.
ID
ZDB-PUB-130611-7
Date
2013
Source
Molecular Biotechnology   55(2): 131-42 (Journal)
Registered Authors
Tanaka, Toshio
Keywords
zebrafish, gene knockdown, morpholino, lissamine, cardiac function, bodipy-ceramide, cardiac troponin T, cardiomyopathy, gene dosage effect, human disease model
MeSH Terms
  • Animals
  • Cardiac Imaging Techniques
  • Embryo, Nonmammalian
  • Fluorescent Dyes
  • Gene Knockdown Techniques*
  • Heart/physiology*
  • Heart Rate
  • Humans
  • Models, Animal
  • Morpholinos/administration & dosage*
  • Morpholinos/metabolism
  • Mutation
  • Myocardial Contraction
  • Oligonucleotides, Antisense/administration & dosage*
  • Oligonucleotides, Antisense/metabolism
  • Phenotype
  • Troponin T/genetics*
  • Troponin T/metabolism*
  • Zebrafish/embryology
  • Zebrafish/genetics*
  • Zebrafish/metabolism
  • Zebrafish Proteins/genetics
  • Zebrafish Proteins/metabolism
PubMed
23674069 Full text @ Mol. Biotechnol.
Abstract

A notable advantage of zebrafish as a model organism is the ease of gene knockdown using morpholino antisense oligonucleotide (MO). However, zebrafish morphants injected with MO for a target protein often show heterogeneous phenotypes, despite controlling the injection volume of the MO solution in all embryos. We developed a method for estimating the quantity of MO injected into each living morphant, based on the co-injection of a control MO labeled with the fluorophore lissamine. By applying this method for knockdown of cardiac troponin T (tnnt2a) in zebrafish, we could efficiently select the partial tnnt2a-depleted zebrafish with a decreased heart rate and impairment of cardiac contraction. To investigate cardiac impairment of the tnnt2a morphant, we performed fluorescent cardiac imaging using Bodipy-ceramide. Cardiac image analysis showed moderate reduction of tnnt2a impaired diastolic distensibility and decreased contraction and relaxation velocities. To the best of our knowledge, this is the first report to analyze the role of tnnt2a in cardiac function in tnnt2a-depleted living animals. Our combinatorial approach can be applied for analyzing the molecular function of any protein associated with human cardiac diseases.

Genes / Markers
Figures
Expression
Phenotype
Mutations / Transgenics
Human Disease / Model
Sequence Targeting Reagents
Fish
Antibodies
Orthology
Engineered Foreign Genes
Mapping