Evolutionary diversification of the avian fatty acid-binding proteins
- Authors
- Hughes, A.L., and Piontkivska, H.
- ID
- ZDB-PUB-111026-3
- Date
- 2011
- Source
- Gene 490(1-2): 1-5 (Journal)
- Registered Authors
- Keywords
- fatty acid binding protein, gene expression, liver proteins, multi-gene family
- MeSH Terms
-
- Animals
- Birds/genetics*
- Chickens/genetics
- Evolution, Molecular*
- Fatty Acid-Binding Proteins/genetics*
- Gene Duplication
- Gene Expression
- Liver
- Molecular Sequence Data
- Phylogeny
- PubMed
- 21986036 Full text @ Gene
Phylogenetic analysis of avian and other vertebrate fatty acid binding proteins (FABPs) supported the hypothesis that several gene duplications within this family occurred prior to the most recent common ancestor (MRCA) of tetrapods and bony fishes. The chicken genome encodes two liver-expressed FABPs: (1) L-FABP or FABP1; and (2) Lb-FABP. We propose that the latter be designated FABP10, because in our phylogenetic analysis it clustered with zebrafish FABP10. Bioinformatic analysis of across-tissue gene expression patterns in the chicken showed some congruence with phylogenetic relationships. On the basis of expression, chicken FABP genes seemed to form two major groups: (1) a cluster of genes many of which showed predominant expression in the digestive system (FABP1, FABP2, FABP6, FABP10, RBP1, and CRABP1); and (2) a cluster of genes most of which had predominant expression in tissues other than those of the digestive system, including muscle and the central nervous system (FABP3, FABP4, FABP5, FABP7, and PMP2). Since these clusters corresponded to major clusters in the phylogenetic tree as well, it seems a plausible hypothesis that the earliest duplication in the vertebrate FABP family led to the divergence of a gut-specialized gene from a gene expressed mainly in nervous and muscular systems. Data on gene expression in livers of two lines of chickens selected for high growth and low growth showed differences between FABP1 and FABP10 expressions in the liver, supporting the hypothesis of functional divergence between the two chicken liver-expressed FABPs related to food intake.