PUBLICATION

Expression of the oscillating gene her1 is directly regulated by hairy/enhancer of split, T-box, and suppressor of hairless proteins in the zebrafish segmentation clock

Authors
Brend, T., and Holley, S.A.
ID
ZDB-PUB-091005-8
Date
2009
Source
Developmental Dynamics : an official publication of the American Association of Anatomists   238(11): 2745-2759 (Journal)
Registered Authors
Holley, Scott
Keywords
somitogenesis, oscillation, her1, Tbx24, fused somites, Su(H), her12
MeSH Terms
  • Transcription Factors/metabolism*
  • Embryo, Nonmammalian/embryology
  • Embryo, Nonmammalian/metabolism
  • Molecular Sequence Data
  • Gene Expression Regulation, Developmental/genetics
  • Gene Expression Regulation, Developmental/physiology
  • Animals
  • Mesoderm/embryology
  • Mesoderm/metabolism
  • Zebrafish/embryology*
  • Zebrafish/genetics
  • Zebrafish/metabolism
  • Zebrafish Proteins/genetics*
  • Zebrafish Proteins/metabolism*
  • Regulatory Sequences, Nucleic Acid/genetics
  • Regulatory Sequences, Nucleic Acid/physiology
  • T-Box Domain Proteins/metabolism*
  • Basic Helix-Loop-Helix Transcription Factors/genetics*
  • Basic Helix-Loop-Helix Transcription Factors/metabolism*
  • Base Sequence
  • Somites/embryology
  • Somites/metabolism*
  • Immunoglobulin J Recombination Signal Sequence-Binding Protein
(all 23)
PubMed
19795510 Full text @ Dev. Dyn.
Abstract
Somites are segmental units of the mesoderm in vertebrate embryos that give rise to the axial skeleton, muscle, and dermis. Somitogenesis occurs in a periodic manner and is governed by a segmentation clock that causes cells to undergo repeated oscillations of gene expression. Here, we present a detailed analysis of cis-regulatory elements that control oscillating expression of the zebrafish her1 gene in the anterior presomitic mesoderm. We identify binding sites for Her proteins and demonstrate that they are necessary for transcriptional repression. This result confirms that direct negative autoregulation of her gene expression constitutes part of the oscillator mechanism. We also characterize binding sites for fused somites/Tbx24 and Suppressor of Hairless proteins and show that they are required for activation of her1 expression. These data provide the foundation for a precise description of the regulatory grammar that defines oscillating gene expression in the zebrafish segmentation clock.
Genes / Markers
Figures
Figure Gallery (6 images)
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Expression
Phenotype
No data available
Mutations / Transgenics
Allele Construct Type Affected Genomic Region
ya1TgTransgenic Insertion
    ya2TgTransgenic Insertion
      ya3TgTransgenic Insertion
        ya4TgTransgenic Insertion
          ya5TgTransgenic Insertion
            ya6TgTransgenic Insertion
              ya7TgTransgenic Insertion
                ya8TgTransgenic Insertion
                  ya9TgTransgenic Insertion
                    1 - 9 of 9
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                    Human Disease / Model
                    No data available
                    Sequence Targeting Reagents
                    No data available
                    Fish
                    Antibodies
                    Name Type Antigen Genes Isotypes Host Organism
                    Ab1-mycmonoclonal
                      IgG1Mouse
                      Ab1-V5monoclonal
                        IgG1Mouse
                        1 - 2 of 2
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                        Orthology
                        No data available
                        Engineered Foreign Genes
                        Marker Marker Type Name
                        emGFPEFGemGFP
                        mCherryEFGmCherry
                        1 - 2 of 2
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                        Mapping
                        No data available