ZFIN ID: ZDB-PERS-120220-1
van Ham, Tjakko
Email: t.vanham@erasmusmc.nl
URL: http://www.erasmusmc.nl/klinische_genetica/research/intro/?lang=en
Affiliation: van Ham Lab
Address: Erasmus MC Dept. of Clinical Genetics Faculty building, P.O. Box 2040 3000 CA, Rotterdam
Country: Netherlands
Phone: +31614737671
Fax:
ORCID ID:


BIOGRAPHY AND RESEARCH INTERESTS


PUBLICATIONS
Mazzolini, J., Le Clerc, S., Morisse, G., Coulonges, C., Kuil, L.E., van Ham, T.J., Zagury, J.F., Sieger, D. (2019) Gene expression profiling reveals a conserved microglia signature in larval zebrafish. Glia. 68(2):298-315
Verhagen, J.M.A., van den Born, M., van der Linde, H.C., Nikkels, P.G.J., Verdijk, R.M., Kivlen, M.H., van Unen, L.M.A., Baas, A.F., Ter Heide, H., van Osch-Gevers, L., Hoogeveen-Westerveld, M., Herkert, J.C., Bertoli-Avella, A.M., van Slegtenhorst, M.A., Wessels, M.W., Verheijen, F.W., Hassel, D., Hofstra, R.M.W., Hegde, R.S., van Hasselt, P.M., van Ham, T.J., van de Laar, I.M.B.H. (2019) Biallelic Variants in ASNA1, Encoding a Cytosolic Targeting Factor of Tail-anchored Proteins, Cause Rapidly Progressive Pediatric Cardiomyopathy. Circulation. Genomic and precision medicine. 12(9):397-406
Kuil, L.E., López Martí, A., Carreras Mascaro, A., van den Bosch, J.C., van den Berg, P., van der Linde, H.C., Schoonderwoerd, K., Ruijter, G.J.G., van Ham, T.J. (2019) Hexb enzyme deficiency leads to lysosomal abnormalities in radial glia and microglia in zebrafish brain development. Glia. 67(9):1705-1718
Oosterhof, N., Chang, I.J., Karimiani, E.G., Kuil, L.E., Jensen, D.M., Daza, R., Young, E., Astle, L., van der Linde, H.C., Shivaram, G.M., Demmers, J., Latimer, C.S., Keene, C.D., Loter, E., Maroofian, R., van Ham, T.J., Hevner, R.F., Bennett, J.T. (2019) Homozygous Mutations in CSF1R Cause a Pediatric-Onset Leukoencephalopathy and Can Result in Congenital Absence of Microglia. American journal of human genetics. 104(5):936-947
Kuil, L.E., Oosterhof, N., Geurts, S.N., van der Linde, H.C., Meijering, E., van Ham, T.J. (2019) Reverse genetic screen reveals that Il34 facilitates yolk sac macrophage distribution and seeding of the brain. Disease models & mechanisms. 12(3):
Tsarouchas, T.M., Wehner, D., Cavone, L., Munir, T., Keatinge, M., Lambertus, M., Underhill, A., Barrett, T., Kassapis, E., Ogryzko, N., Feng, Y., van Ham, T.J., Becker, T., Becker, C.G. (2018) Dynamic control of proinflammatory cytokines Il-1β and Tnf-α by macrophages in zebrafish spinal cord regeneration. Nature communications. 9:4670
Oosterhof, N., Kuil, L.E., van der Linde, H.C., Burm, S.M., Berdowski, W., van Ijcken, W.F.J., van Swieten, J.C., Hol, E.M., Verheijen, M.H.G., van Ham, T.J. (2018) Colony-Stimulating Factor 1 Receptor (CSF1R) Regulates Microglia Density and Distribution, but Not Microglia Differentiation In Vivo. Cell Reports. 24:1203-1217.e6
Gui, H., Schriemer, D., Cheng, W.W., Chauhan, R.K., Antiňolo, G., Berrios, C., Bleda, M., Brooks, A.S., Brouwer, R.W., Burns, A.J., Cherny, S.S., Dopazo, J., Eggen, B.J., Griseri, P., Jalloh, B., Le, T.L., Lui, V.C., Luzón-Toro, B., Matera, I., Ngan, E.S., Pelet, A., Ruiz-Ferrer, M., Sham, P.C., Shepherd, I.T., So, M.T., Sribudiani, Y., Tang, C.S., van den Hout, M.C., van der Linde, H.C., van Ham, T.J., van IJcken, W.F., Verheij, J.B., Amiel, J., Borrego, S., Ceccherini, I., Chakravarti, A., Lyonnet, S., Tam, P.K., Garcia-Barceló, M.M., Hofstra, R.M. (2017) Whole exome sequencing coupled with unbiased functional analysis reveals new Hirschsprung disease genes. Genome biology. 18:48
Oosterhof, N., Kuil, L.E., van Ham, T.J. (2017) Microglial Activation by Genetically Targeted Conditional Neuronal Ablation in the Zebrafish. Methods in molecular biology (Clifton, N.J.). 1559:377-390
Oosterhof, N., Holtman, I.R., Kuil, L.E., van der Linde, H.C., Boddeke, E.W., Eggen, B.J., van Ham, T.J. (2017) Identification of a conserved and acute neurodegeneration-specific microglial transcriptome in the zebrafish. Glia. 65(1):138-149
Kuipers, J., Kalicharan, R.D., Wolters, A.H., van Ham, T.J., Giepmans, B.N. (2016) Large-scale Scanning Transmission Electron Microscopy (Nanotomy) of Healthy and Injured Zebrafish Brain. Journal of visualized experiments : JoVE. (111)
Oosterhof, N., Boddeke, E., van Ham, T.J. (2015) Immune cell dynamics in the CNS: Learning from the zebrafish. Glia. 63(5):719-35
van Ham, T.J., Brady, C.A., Kalicharan, R.D., Oosterhof, N., Kuipers, J., Veenstra-Algra, A., Sjollema, K.A., Peterson, R.T., Kampinga, H.H., Giepmans, B.N. (2014) Intravital correlated microscopy reveals differential macrophage and microglial dynamics during resolution of neuroinflammation. Disease models & mechanisms. 7:857-869
Kokel, D., Dunn, T.W., Ahrens, M.B., Alshut, R., Cheung, C.Y., Saint-Amant, L., Bruni, G., Mateus, R., van Ham, T.J., Shiraki, T., Fukada, Y., Kojima, D., Yeh, J.R., Mikut, R., von Lintig, J., Engert, F., and Peterson, R.T. (2013) Identification of Nonvisual Photomotor Response Cells in the Vertebrate Hindbrain. The Journal of neuroscience : the official journal of the Society for Neuroscience. 33(9):3834-3843
van Ham, T.J., Kokel, D., and Peterson, R.T. (2012) Apoptotic Cells Are Cleared by Directional Migration and elmo1- Dependent Macrophage Engulfment. Current biology : CB. 22(9):830-836
van Ham, T.J., Mapes, J., Kokel, D., and Peterson, R.T. (2010) Live imaging of apoptotic cells in zebrafish. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 24(11):4336-4342

NON-ZEBRAFISH PUBLICATIONS
Palchaudhuri R, Lambrecht MJ, Botham RC, Partlow KC, van Ham TJ, Putt KS, Nguyen LT, Kim SH, Peterson RT, Fan TM, Hergenrother PJ. A Small Molecule that
Induces Intrinsic Pathway Apoptosis with Unparalleled Speed. Cell Rep. 2015 Dec 1;13(9):2027-36. doi: 10.1016/j.celrep.2015.10.042.

Kuipers J, van Ham TJ, Kalicharan RD, Veenstra-Algra A, Sjollema KA, Dijk F,Schnell U, Giepmans BN. FLIPPER, a combinatorial probe for correlated live
imaging and electron microscopy, allows identification and quantitative analysis of various cells and organelles. Cell Tissue Res. 2015 Apr;360(1):61-70. doi:10.1007/s00441-015-2142-7.

Kaminski Schierle GS, Bertoncini CW, Chan FT, van der Goot AT, Schwedler S, Skepper J, Schlachter S, van Ham T, Esposito A, Kumita JR, Nollen EA, Dobson CM, Kaminski CF. (2011) A FRET sensor for non-invasive imaging of amyloid formation in vivo. Chemphyschem. Feb 25;12(3):673-80. Epub 2011 Feb 9.

van Ham TJ, Holmberg M, Teuling E, van der Goot AT, Thijssen KL, van Bergeijk P, Nollen EA. (2010) Identification of MOAG-4/SERF as a Regulator of Age-Related Proteotoxicity. Cell. Aug 20;142(4):601-612.

van Ham TJ, Esposito A, Kumita JR, Hsu ST, Kaminski Schierle GS, Kaminski CF, Dobson CM, Nollen EA, Bertoncini CW. (2009) Towards Multiparametric Fluorescent Imaging of Amyloid Formation: Studies of a YFP Model of alpha-Synuclein Aggregation. J Mol Biol. Nov 3;395, 627-642.

Roodveldt C, Bertoncini CW, Andersson A, van der Goot AT, Hsu ST, Fern�ndez-Montesinos R, de Jong J, van Ham TJ, Nollen EA, Pozo D, Christodoulou J, Dobson CM. (2009) Chaperone proteostasis in Parkinson's disease: stabilization of the Hsp70/alpha-synuclein complex by Hip. EMBO J. Dec 2;28(23):3758-70.

van Ham TJ, Breitling R, Swertz MA, Nollen EA. (2009) Neurodegenerative diseases: Lessons from genome-wide screens in small model organisms. EMBO Molecular Medicine. Review, 8-9, 360-370

van Ham TJ, Thijssen KL, Breitling R, Hofstra RM, Plasterk RH, Nollen EA. (2008) C. elegans model identifies genetic modifiers of alpha-synuclein inclusion formation during aging. PLoS Genet. Mar 21;4(3):e1000027.

van Ham TJ and Nollen EAA. (2011) Caenorhabditis elegans as a Model Organism for Dementia, Animals modles of dementia, Peter Paul De Deyn and Debby Van Dam (eds.), Animal Models of Dementia, Neuromethods, 2011, Volume 48, Part 4, 241-253