ZFIN ID: ZDB-PERS-111118-4
Savy, Thierry
Email: thierry.savy@polytechnique.edu
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Affiliation: Peyriéras Lab
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BIOGRAPHY AND RESEARCH INTERESTS


PUBLICATIONS
Dokmegang, J., Nguyen, H., Kardash, E., Savy, T., Cavaliere, M., Peyriéras, N., Doursat, R. (2021) Quantification of cell behaviors and computational modelling show that cell directional behaviors drive zebrafish pectoral fin morphogenesis. Bioinformatics (Oxford, England). 37(18):2946-2954
Araya, C., Häkkinen, H.M., Carcamo, L., Cerda, M., Savy, T., Rookyard, C., Peyriéras, N., Clarke, J.D.W. (2019) Publisher Correction: Cdh2 coordinates Myosin-II dependent internalisation of the zebrafish neural plate. Scientific Reports. 9:7699
Araya, C., Häkkinen, H.M., Carcamo, L., Cerda, M., Savy, T., Rookyard, C., Peyriéras, N., Clarke, J.D.W. (2019) Cdh2 coordinates Myosin-II dependent internalisation of the zebrafish neural plate. Scientific Reports. 9:1835
Cornet, C., Calzolari, S., Miñana-Prieto, R., Dyballa, S., van Doornmalen, E., Rutjes, H., Savy, T., D'Amico, D., Terriente, J. (2017) ZeGlobalTox: An Innovative Approach to Address Organ Drug Toxicity Using Zebrafish. International Journal of Molecular Sciences. 18(4)
Dyballa, S., Savy, T., Germann, P., Mikula, K., Remesikova, M., Špir, R., Zecca, A., Peyriéras, N., Pujades, C. (2017) Distribution of neurosensory progenitor pools during inner ear morphogenesis unveiled by cell lineage reconstruction. eLIFE. 6
Faure, E., Savy, T., Rizzi, B., Melani, C., Stašová, O., Fabrèges, D., Špir, R., Hammons, M., Čúnderlík, R., Recher, G., Lombardot, B., Duloquin, L., Colin, I., Kollár, J., Desnoulez, S., Affaticati, P., Maury, B., Boyreau, A., Nief, J.Y., Calvat, P., Vernier, P., Frain, M., Lutfalla, G., Kergosien, Y., Suret, P., Remešíková, M., Doursat, R., Sarti, A., Mikula, K., Peyriéras, N., Bourgine, P. (2016) A workflow to process 3D+time microscopy images of developing organisms and reconstruct their cell lineage. Nature communications. 7:8674
Castro-González, C., Luengo-Oroz, M.A., Duloquin, L., Savy, T., Rizzi, B., Desnoulez, S., Doursat, R., Kergosien, Y.L., Ledesma-Carbayo, M.J., Bourgine, P., Peyriéras, N., Santos, A. (2014) A Digital Framework to Build, Visualize and Analyze a Gene Expression Atlas with Cellular Resolution in Zebrafish Early Embryogenesis. PLoS Computational Biology. 10:e1003670
Recher, G., Jouralet, J., Brombin, A., Heuzé, A., Mugniery, E., Hermel, J.M., Desnoulez, S., Savy, T., Herbomel, P., Bourrat, F., Peyriéras, N., Jamen, F., and Joly, J.S. (2013) Zebrafish midbrain slow-amplifying progenitors exhibit high levels of transcripts for nucleotide and ribosome biogenesis. Development (Cambridge, England). 140(24):4860-9
Luengo-Oroz, M.A., Pastor, D., Castro, C., Faure, E., Savy, T., Lombardot, B., Rubio-Guivernau, J.L., Duloquin, L., Ledesma-Carbayo, M., Bourgine, P., Peyrieras, N., and Santos, A. (2012) 3D+t Morphological Processing: Applications to Embryogenesis Image Analysis. IEEE transactions on image processing : a publication of the IEEE Signal Processing Society. 29(9):792-9
Luengo-Oroz, M., Rubio-Guivernau, J., Faure, E., Savy, T., Duloquin, L., Olivier, N., Pastor, D., Ledesma-Carbayo, M., Debarre, D., Bourgine, P., Beaurepaire, E., Peyrieras, N., and Santos, A. (2012) Methodology for reconstructing early zebrafish development from in-vivo multiphoton microscopy. IEEE transactions on image processing : a publication of the IEEE Signal Processing Society. 21(4):2335-2340
Olivier, N., Luengo-Oroz, M.A., Duloquin, L., Faure, E., Savy, T., Veilleux, I., Solinas, X., Débarre, D., Bourgine, P., Santos, A., Peyriéras, N., and Beaurepaire, E. (2010) Cell lineage reconstruction of early zebrafish embryos using label-free nonlinear microscopy. Science (New York, N.Y.). 329(5994):967-971
Castro-Gonzalez, C., Luengo-Oroz, M.A., Douloquin, L., Savy, T., Melani, C., Desnoulez, S., Ledesma-Carbayo, M.J., Bourginey, P., Peyrieras, N., and Santos, A. (2010) Towards a digital model of zebrafish embryogenesis. Integration of cell tracking and gene expression quantification. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. 1:5520-5523
Pastor, D., Luengo-Oroz, M.A., Lombardot, B., Gonzalvez, I., Duloquin, L., Savy, T., Bourgine, P., Peyrieras, N., and Santos, A. (2009) Cell tracking in fluorescence images of embryogenesis processes with morphological reconstruction by 4D-tubular structuring elements. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. 1:970-973

NON-ZEBRAFISH PUBLICATIONS