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Research
General Information
ZIRC
ZFIN ID: ZDB-PERS-020116-25
Rinner, Oliver
Email: rinner@imsb.biol.ethz.ch
URL: http://www.imsb.ethz.ch/researchgroup/rudolfa/people/orinner
Affiliation:
Address: Swiss Federal Institute of Technology(ETH)Zürich Department of Biology and Brain Research Institute University of Zürich Winterthurerstrasse 190 Zürich, CH - 8057 Switzerland
Country:
Phone: +41-44-63-32698
Fax:
Orcid ID:


BIOGRAPHY AND RESEARCH INTERESTS
From 2002-2004, I worked in the lab of Stephan Neuhauss on cone vison and behavioral genetics.
Currently I am a postdoctoral fellow at the Institute for Molecular Systems Biology, ETH Zurich, in Ruedi Aebersold's lab, where I develop mass spectrometric methods for the analysis of protein complexes.


PUBLICATIONS
Schonthaler, H.B., Fleisch, V.C., Biehlmaier, O., Makhankov, Y., Rinner, O., Bahadori, R., Geisler, R., Schwarz, H., Neuhauss, S.C., and Dahm, R. (2008) The zebrafish mutant lbk/vam6 resembles human multi-systemic disorders caused by aberrant trafficking of endosomal vesicles. Development (Cambridge, England). 135(2):387-399
Schonthaler, H.B., Lampert, J.M., Isken, A., Rinner, O., Mader, A., Gesemann, M., Oberhauser, V., Golczak, M., Biehlmaier, O., Palczewski, K., Neuhauss, S.C., and von Lintig, J. (2007) Evidence for RPE65-independent vision in the cone-dominated zebrafish retina. The European journal of neuroscience. 26(7):1940-1949
Bahadori, R., Rinner, O., Schonthaler, H.B., Biehlmaier, O., Makhankov, Y.V., Rao, P., Jagadeeswaran, P., and Neuhauss, S.C. (2006) The Zebrafish fade out Mutant: A Novel Genetic Model for Hermansky-Pudlak Syndrome. Investigative ophthalmology & visual science. 47(10):4523-4531
Huang, Y.Y., Rinner, O., Hedinger, P., Liu, S.C., and Neuhauss, S.C. (2006) Oculomotor instabilities in zebrafish mutant belladonna: a behavioral model for congenital nystagmus caused by axonal misrouting. The Journal of neuroscience : the official journal of the Society for Neuroscience. 26(39):9873-9880
Rinner, O., Makhankov, Y.V., Biehlmaier, O., and Neuhauss, S.C. (2005) Knockdown of Cone-Specific Kinase GRK7 in Larval Zebrafish Leads to Impaired Cone Response Recovery and Delayed Dark Adaptation. Neuron. 47(2):231-242
Seiler, C., Finger-Baier, K.C., Rinner, O., Makhankov, Y.V., Schwarz, H., Neuhauss, S.C., and Nicolson, T. (2005) Duplicated genes with split functions: independent roles of protocadherin15 orthologues in zebrafish hearing and vision. Development (Cambridge, England). 132(3):615-623
Rinner, O. (2005) Cone specific mechanisms of vision in larval zebrafish. Ph.D. Thesis. :103p
Rinner, O., Rick, J.M., and Neuhauss, S.C. (2005) Contrast sensitivity, spatial and temporal tuning of the larval zebrafish optokinetic response. Investigative ophthalmology & visual science. 46(1):137-142
Makhankov, Y.V., Rinner, O., and Neuhauss, S.C. (2004) An inexpensive device for non-invasive electroretinography in small aquatic vertebrates. Neurosci. Methods. 135(1-2):205-210
Bahadori, R., Huber, M., Rinner, O., Seeliger, M.W., Geiger-Rudolph, S., Geisler, R., and Neuhauss, S.C. (2003) Retinal function and morphology in two zebrafish models of oculo-renal syndromes. The European journal of neuroscience. 18(6):1377-1386

NON-ZEBRAFISH PUBLICATIONS
Rinner O, Mueller LN, Hubalek M, Muller M, Gstaiger M, Aebersold R. An integrated mass spectrometric and computational framework for the analysis of protein interaction networks.
Nat Biotechnol. 2007 Mar;25(3):345-52. Epub 2007 Feb 25.

Taher L, Rinner O, Garg S, Sczyrba A, Morgenstern B (2004) AGenDA: gene prediction by cross-species sequence comparison. Nucleic Acids Res 32:W305-308.

Taher, L., Rinner, O., Garg, S., Sczyrba, A., Brudno, M., Batzoglou, S., & Morgenstern, B. (2003). AGenDA: homology-based gene prediction. Bioinformatics, 19 (12), 1575-1577.

Rinner, O., & Morgenstern, B. (2002). AGenDA: gene prediction by comparative sequence analysis. In Silico Biol, 2 (3), 195-205.

Morgenstern, B., Rinner, O., Abdeddaim, S., Haase, D., Mayer, K.F., Dress, A.W., & Mewes, H.W. (2002). Exon discovery by genomic sequence alignment. Bioinformatics, 18 (6), 777-787.

Rinner, O., & Gegenfurtner, K.R. (2002). Cone contributions to colour constancy. Perception, 31 (6), 733-746.

Rinner, O., & Gegenfurtner, K.R. (2000). Time course of chromatic adaptation for color appearance and discrimination. Vision Res, 40 (14), 1813-1826.


D'Zmura, M., Rinner, O., & Gegenfurtner, K.R. (2000). The colors seen behind transparent filters. Perception, 29 (8), 911-926.