ZFIN ID: ZDB-LAB-170209-9
Jing-Xia Liu Lab
PI/Director: Liu, Jing-xia
Contact Person: Liu, Jing-xia
Email: ichliu@mail.hzau.edu.cn
URL:
Address: Laboratory of fish stress developmental biology College of Fisheries, Huazhong Agricultural University Wuhan 430072, China
Country: China
Phone: 86-27-87282113
Fax: 86-27-87282113
Line Designation: hza


GENOMIC FEATURES ORIGINATING FROM THIS LAB
Show all 8 genomic features


STATEMENT OF RESEARCH INTERESTS
We are interested in the interactive regulation networks between environmental factors including drugs, metal ions and their nanoparticles (outside of cells) and genes (in cells ) in regulating development and regeneration of hematopoietic system (hematopoietic cells/ hematopoietic stem cells) and locomotor behavior systems by approaches of chemical screens, genetic screens, and biochemical analysis in zebrafish and in human cell lines. Another aim of our lab is to reveal the cooperativity of the genetic and epigenetic regulators in all steps of adaptive evolution to environmental factors during fish development by applying comparative genomics between short-time transcriptome responses and long-time regulatory adaptations.


LAB MEMBERS


ZEBRAFISH PUBLICATIONS OF LAB MEMBERS
Liu, W., Lin, S., Li, L., Tai, Z., Liu, J.X. (2023) Zebrafish ELL-associated factors Eaf1/2 modulate erythropoiesis via regulating gata1a expression and WNT signaling to facilitate hypoxia tolerance. Cell regeneration (London, England). 12:1010
Tai, Z., Li, L., Zhao, G., Liu, J.X. (2022) Copper stress impairs angiogenesis and lymphangiogenesis during zebrafish embryogenesis by down-regulating pERK1/2-foxm1-MMP2/9 axis and epigenetically regulating ccbe1 expression. Angiogenesis. 25(2):241-257
Tai, Z., Guan, P., Zhang, T., Liu, W., Li, L., Wu, Y., Li, G., Liu, J.X. (2021) Effects of parental environmental copper stress on offspring development: DNA methylation modification and responses of differentially methylated region-related genes in transcriptional expression. Journal of hazardous materials. 424(Pt C):127600
Jin, X., Liu, W., Miao, J., Tai, Z., Li, L., Guan, P., Liu, J.X. (2021) Copper ions impair zebrafish skeletal myofibrillogenesis via epigenetic regulation. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 35:e21686
Zhang, T., Guan, P., Liu, W., Zhao, G., Fang, Y., Fu, H., Gui, J.F., Li, G., Liu, J.X. (2020) Copper Stress Induces Zebrafish Central Neural System Myelin Defects via WNT/NOTCH-hoxb5b Signaling and pou3f1/fam168a/fam168b DNA Methylation. Biochimica et biophysica acta. Gene regulatory mechanisms. 1863(10):194612
Zhao, G., Sun, H., Zhang, T., Liu, J.X. (2020) Copper induce zebrafish retinal developmental defects via triggering stresses and apoptosis. Cell communication and signaling : CCS. 18:45
Zhao, G., Zhang, T., Sun, H., Liu, J.X. (2019) Copper nanoparticles induce zebrafish intestinal defects via endoplasmic reticulum and oxidative stress. Metallomics : integrated biometal science. 12(1):12-22
Chen, M., Luo, Y., Xu, J., Chang, M.X., Liu, J.X. (2019) Copper Regulates the Susceptibility of Zebrafish Larvae to Inflammatory Stimuli by Controlling Neutrophil/Macrophage Survival. Frontiers in immunology. 10:2599
Sun, H., Chen, M., Wang, Z., Zhao, G., Liu, J.X. (2019) Transcriptional profiles and copper stress responses in zebrafish cox17 mutants. Environmental pollution (Barking, Essex : 1987). 256:113364
Tai, Z., Guan, P., Wang, Z., Li, L., Zhang, T., Li, G., Liu, J.X. (2019) Common responses of fish embryos to metals: an integrated analysis of transcriptomes and methylomes in zebrafish embryos under the stress of copper ions or silver nanoparticles. Metallomics : integrated biometal science. 11(9):1452-1464
Zhao, G., Wang, Z., Xu, L., Xia, C.X., Liu, J.X. (2019) Silver nanoparticles induce abnormal touch responses by damaging neural circuits in zebrafish embryos. Chemosphere. 229:169-180
Zhang, Y., Zhang, R., Sun, H., Chen, Q., Yu, X., Zhang, T., Yi, M., Liu, J.X. (2018) Copper inhibits hatching of fish embryos via inducing reactive oxygen species and down-regulating Wnt signaling. Aquatic toxicology (Amsterdam, Netherlands). 205:156-164
Zhang, Y., Wang, Z., Zhao, G., Liu, J.X. (2018) Silver nanoparticles affect lens rather than retina development in zebrafish embryos. Ecotoxicology and environmental safety. 163:279-288
Liu, J.X., Xu, Q.H., Yu, X., Zhang, T., Xie, X., Ouyang, G. (2018) Eaf1 and Eaf2 mediate zebrafish dorsal-ventral axis patterning via suppressing Wnt/β-Catenin activity.. International journal of biological sciences. 14:705-716
Xu, Q.H., Guan, P., Zhang, T., Lu, C., Li, G., Liu, J.X. (2018) Silver nanoparticles impair zebrafish skeletal and cardiac myofibrillogenesis and sarcomere formation. Aquatic toxicology (Amsterdam, Netherlands). 200:102-113
Zhang, Y., Ding, Z., Zhao, G., Zhang, T., Xu, Q., Cui, B., Liu, J.X. (2018) Transcriptional responses and mechanisms of copper nanoparticle toxicology on zebrafish embryos. Journal of hazardous materials. 344:1057-1068
Xu, J., Zhang, R., Zhang, T., Zhao, G., Huang, Y., Wang, H., Liu, J.X. (2017) Copper impairs zebrafish swimbladder development by down-regulating Wnt signaling. Aquatic toxicology (Amsterdam, Netherlands). 192:155-164
Liu, J.X., Xu, Q.H., Li, S., Yu, X., Liu, W., Ouyang, G., Zhang, T., Chen, L.L. (2017) Transcriptional factors Eaf1/2 inhibit endoderm and mesoderm formation via suppressing TGF-β signaling. Biochimica et biophysica acta. 1860(10):1103-1116
Wang, Y., Zhang, H., Lu, Y., Wang, F., Liu, L., Liu, J., Liu, X. (2017) Comparative transcriptome analysis of zebrafish (Danio rerio) brain and spleen infected with spring viremia of carp virus (SVCV). Fish & shellfish immunology. 69:35-45
Xu, L., Xu, Q.H., Zhou, X.Y., Yin, L.Y., Guan, P.P., Zhang, T., Liu, J.X. (2017) Mechanisms of silver_nanoparticles induced hypopigmentation in embryonic zebrafish. Aquatic toxicology (Amsterdam, Netherlands). 184:49-60
Gu, W., Zhan, H., Zhou, X.Y., Yao, L., Yan, M., Chen, A., Liu, J., Ren, X., Zhang, X., Liu, J.X., Liu, G. (2017) MicroRNA-22 regulates inflammation and angiogenesis via targeting VE-cadherin. FEBS letters. 591(3):513-526
Cui, B., Ren, L., Xu, Q.H., Yin, L.Y., Zhou, X.Y., Liu, J.X. (2016) Silver_ nanoparticles inhibited erythrogenesis during zebrafish embryogenesis. Aquatic toxicology (Amsterdam, Netherlands). 177:295-305
Zhou, X.Y., Zhang, T., Ren, L., Wu, J.J., Wang, W., Liu, J.X. (2016) Copper elevated embryonic hemoglobin through reactive oxygen species during zebrafish erythrogenesis. Aquatic toxicology (Amsterdam, Netherlands). 175:1-11
Zhang, T., Xu, L., Wu, J.J., Wang, W.M., Mei, J., Ma, X.F., Liu, J.X. (2015) Transcriptional responses and mechanisms of copper-induced dysfunctional locomotor behavior in zebrafish embryos. Toxicological sciences : an official journal of the Society of Toxicology. 148(1):299-310
Zhang, T., Zhou, X.Y., Ma, X.F., Liu, J.X. (2015) Mechanisms of cadmium-caused eye hypoplasia and hypopigmentation in zebrafish embryos. Aquatic toxicology (Amsterdam, Netherlands). 167:68-76
Xu, C., Tabebordbar, M., Iovino, S., Ciarlo, C., Liu, J., Castiglioni, A., Price, E., Liu, M., Barton, E.R., Kahn, C.R., Wagers, A.J., and Zon, L.I. (2013) A Zebrafish Embryo Culture System Defines Factors that Promote Vertebrate Myogenesis across Species. Cell. 155(4):909-921
Liu, J.X., Zhang, D., Xie, X., Ouyang, G., Liu, X., Sun, Y., and Xiao, W. (2013) Eaf1 and Eaf2 negatively regulate canonical Wnt/β-catenin signaling. Development (Cambridge, England). 140(5):1067-1078
Wan, X., Hu, B., Liu, J.X., Feng, X., and Xiao, W. (2011) Zebrafish mll is essential for haematopoiesis. The Journal of biological chemistry. 286(38):33345-57
Xie, X.W., Liu, J.X., Hu, B., and Xiao, W. (2011) Zebrafish foxo3b Negatively Regulates Canonical Wnt Signaling to Affect Early Embryogenesis. PLoS One. 6(9):e24469
Wan, X., Ji, W., Mei, X., Zhou, J., Liu, J.X., Fang, C., and Xiao, W. (2010) Negative Feedback Regulation of Wnt4 Signaling by EAF1 and EAF2/U19. PLoS One. 5(2):e9118
Liu, J.X., Hu, B., Wang, Y., Gui, J.F., and Xiao, W. (2009) Zebrafish eaf1 and eaf2/u19 mediate effective convergence and extension movements through the maintenance of wnt11 and wnt5 expression. The Journal of biological chemistry. 284(24):16679-16692
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