ZFIN Lab: Nicoli Lab

ZFIN ID: ZDB-LAB-150805-2

Nicoli Lab

PI/Director:	Nicoli, Stefania
Contact Person:	Cavanaugh, Meredith
Email:	meredith.cavanaugh@gmail.com
URL:	http://nicolilab.com
Address:	300 George Street, 7th floor, New Haven, CT 06510 USA
Country:	United States
Phone:	203-737-4151
Fax:
Line Designation:	ya

GENOMIC FEATURES ORIGINATING FROM THIS LAB

Show all 16 genomic features

STATEMENT OF RESEARCH INTERESTS

LAB MEMBERS

Boraas, Liana Post-Doc	Ghersi, Joey Post-Doc	Cheng, Siyuan (Lily) Graduate Student
Cavanaugh, Meredith Fish Facility Staff	Hintzen, Jared

ZEBRAFISH PUBLICATIONS OF LAB MEMBERS

Prendergast, A., Ziganshin, B.A., Papanikolaou, D., Zafar, M.A., Nicoli, S., Mukherjee, S., Elefteriades, J.A. (2022) Phenotyping Zebrafish Mutant Models to Assess Candidate Genes Associated with Aortic Aneurysm. Genes. 13(1):

Kasper, D.M., Hintzen, J., Wu, Y., Ghersi, J.J., Mandl, H.K., Salinas, K.E., Armero, W., He, Z., Sheng, Y., Xie, Y., Heindel, D.W., Park, E.J., Sessa, W.C., Mahal, L.K., Lebrilla, C., Hirschi, K.K., Nicoli, S. (2020) The N-glycome regulates the endothelial-to-hematopoietic transition. Science (New York, N.Y.). 370:1186-1191

Ghersi, J.J., Mahony, C.B., Bertrand, J.Y. (2019) bif1, a new BMP signaling inhibitor, regulates embryonic hematopoiesis in the zebrafish. Development (Cambridge, England). 146(6):

Moro, A., Driscoll, T.P., Boraas, L.C., Armero, W., Kasper, D.M., Baeyens, N., Jouy, C., Mallikarjun, V., Swift, J., Ahn, S.J., Lee, D., Zhang, J., Gu, M., Gerstein, M., Schwartz, M., Nicoli, S. (2019) MicroRNA-dependent regulation of biomechanical genes establishes tissue stiffness homeostasis. Nature cell biology. 21(3):348-358

Kasper, D.M., Nicoli, S. (2018) Epigenetic and Epitranscriptomic Factors Make a Mark on Hematopoietic Stem Cell Development. Current stem cell reports. 4:22-32

Mo, E.S., Cheng, Q., Reshetnyak, A.V., Schlessinger, J., Nicoli, S. (2017) Alk and Ltk ligands are essential for iridophore development in zebrafish mediated by the receptor tyrosine kinase Ltk. Proceedings of the National Academy of Sciences of the United States of America. 114(45):12027-12032

Kasper, D.M., Moro, A., Ristori, E., Narayanan, A., Hill-Teran, G., Fleming, E., Moreno-Mateos, M., Vejnar, C.E., Zhang, J., Lee, D., Gu, M., Gerstein, M., Giraldez, A., Nicoli, S. (2017) MicroRNAs Establish Uniform Traits during the Architecture of Vertebrate Embryos. Developmental Cell. 40:552-565.e5

Narayanan, A., Hill-Teran, G., Moro, A., Ristori, E., Kasper, D.M., A Roden, C., Lu, J., Nicoli, S. (2016) In vivo mutagenesis of miRNA gene families using a scalable multiplexed CRISPR/Cas9 nuclease system. Scientific Reports. 6:32386

Fortuna, V., Pardanaud, L., Brunet, I., Ola, R., Ristori, E., Santoro, M.M., Nicoli, S., Eichmann, A. (2015) Vascular Mural Cells Promote Noradrenergic Differentiation of Embryonic Sympathetic Neurons. Cell Reports. 11(11):1786-96

Kallakuri, S., Yu, J.A., Li, J., Li, Y., Weinstein, B.M., Nicoli, S., Sun, Z. (2015) Endothelial Cilia Are Essential for Developmental Vascular Integrity in Zebrafish. Journal of the American Society of Nephrology : JASN. 26(4):864-75

Ristori, E., Lopez-Ramirez, M.A., Narayanan, A., Hill-Teran, G., Moro, A., Calvo, C.F., Thomas, J.L., Nicoli, S. (2015) A Dicer-miR-107 Interaction Regulates Biogenesis of Specific miRNAs Crucial for Neurogenesis. Developmental Cell. 32(5):546-60

Ristori, E., Nicoli, S. (2015) miRNAs Expression Profile in Zebrafish Developing Vessels. Methods in molecular biology (Clifton, N.J.). 1214:129-50

Villefranc, J.A., Nicoli, S., Bentley, K., Jeltsch, M., Zarkada, G., Moore, J.C., Gerhardt, H., Alitalo, K., and Lawson, N.D. (2013) A truncation allele in vascular endothelial growth factor c reveals distinct modes of signaling during lymphatic and vascular development. Development (Cambridge, England). 140(7):1497-1506

Tobia, C., Chiodelli, P., Nicoli, S., Dell'era, P., Buraschi, S., Mitola, S., Foglia, E., van Loenen, P.B., Alewijnse, A.E., and Presta, M. (2012) Sphingosine-1-Phosphate Receptor-1 Controls Venous Endothelial Barrier Integrity in Zebrafish. Arterioscler. Thromb. Vasc. Biol.. 32(9):e104-116

Rissone, A., Foglia, E., Sangiorgio, L., Cermenati, S., Nicoli, S., Cimbro, S., Beltrame, M., Bussolino, F., Cotelli, F., and Arese, M. (2012) The Synaptic Proteins beta-Neurexin and Neuroligin Synergize With Extracellular Matrix-Binding Vascular Endothelial Growth Factor A During Zebrafish Vascular Development. Arterioscler. Thromb. Vasc. Biol.. 32(7):1563-1572

Nicoli, S., Knyphausen, C.P., Zhu, L.J., Lakshmanan, A., and Lawson, N.D. (2012) miR-221 Is Required for Endothelial Tip Cell Behaviors during Vascular Development. Developmental Cell. 22(2):418-429

Zizioli, D., Forlanelli, E., Guarienti, M., Nicoli, S., Fanzani, A., Bresciani, R., Borsani, G., Preti, A., Cotelli, F., and Schu, P. (2010) Characterization of the AP-1 mu1A and mu1B adaptins in zebrafish (Danio rerio). Developmental Dynamics : an official publication of the American Association of Anatomists. 239(9):2404-2412

Nicoli, S., Standley, C., Walker, P., Hurlstone, A., Fogarty, K.E., and Lawson, N.D. (2010) MicroRNA-mediated integration of haemodynamics and Vegf signalling during angiogenesis. Nature. 464(7292):1196-1200

Nicoli, S., De Sena, G., and Presta, M. (2009) Fibroblast Growth Factor 2-induced angiogenesis in zebrafish: the zebrafish yolk membrane (ZFYM) angiogenesis assay. Journal of Cellular and Molecular Medicine. 13(8b):2061-2068

Nicoli, S., Tobia, C., Gualandi, L., De Sena, G., and Presta, M. (2008) Calcitonin receptor-like receptor guides arterial differentiation in Zebrafish. Blood. 111(10):4965-4972

Nicoli, S., and Presta, M. (2007) The zebrafish/tumor xenograft angiogenesis assay. Nature Protocols. 2(11):2918-2923