Gene

ythdc2

ID

ZDB-GENE-220119-1

Name

YTH domain containing 2

Symbol

ythdc2 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Li et al., 2022
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ythdc2 Human Ortholog

No data available

Associated With ythdc2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001374	R3H domain
Domain	IPR001650	Helicase, C-terminal domain-like
Domain	IPR007275	YTH domain
Domain	IPR007502	Helicase-associated domain
Domain	IPR011545	DEAD/DEAH box helicase domain
Domain	IPR011709	DEAD-box helicase, OB fold
Domain	IPR014001	Helicase superfamily 1/2, ATP-binding domain
Domain	IPR034083	DExH-box ATP-dependent RNA helicase, R3H domain
Domain	IPR048333	Helicase associated domain (HA2), winged-helix domain
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Homologous_superfamily	IPR036867	R3H domain superfamily

Domain Details Per Protein

Protein	Length	Ankyrin repeat-containing domain superfamily	DEAD-box helicase, OB fold	DEAD/DEAH box helicase domain	DExH-box ATP-dependent RNA helicase, R3H domain	Helicase-associated domain	Helicase associated domain (HA2), winged-helix domain	Helicase, C-terminal domain-like	Helicase superfamily 1/2, ATP-binding domain	P-loop containing nucleoside triphosphate hydrolase	R3H domain	R3H domain superfamily	YTH domain
UniProtKB:A0A8M9Q954 InterPro	1381
UniProtKB:A0A8M9PKP9 InterPro	1130
UniProtKB:A0A8M9PY86 InterPro	1055

Transcripts

Genome Browsers

No data available

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations