Gene

si:ch211-212k18.13

ID

ZDB-GENE-160728-93

Name

si:ch211-212k18.13

Symbol

si:ch211-212k18.13 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in regulation of protein stability. Predicted to act upstream of or within protein deubiquitination and proteolysis. Predicted to be active in cytosol and nucleus.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:ch211-212k18.13 Human Ortholog

No data available

Associated With si:ch211-212k18.13 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR018200	Ubiquitin specific protease, conserved site
Domain	IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Domain	IPR006703	AIG1-type guanine nucleotide-binding (G) domain
Domain	IPR028889	Ubiquitin specific protease domain
Family	IPR050164	Ubiquitin carboxyl-terminal hydrolases
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily	IPR038765	Papain-like cysteine peptidase superfamily

Domain Details Per Protein

Protein	Length	AIG1-type guanine nucleotide-binding (G) domain	Papain-like cysteine peptidase superfamily	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	P-loop containing nucleoside triphosphate hydrolase	Ubiquitin carboxyl-terminal hydrolases	Ubiquitin specific protease, conserved site	Ubiquitin specific protease domain
UniProtKB:A0A8M9Q292 InterPro	519

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	si:ch211-212k18.13-201 (1) Ensembl	Ensembl		1,721 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-212k18.13-002 (1) Ensembl	Ensembl		794 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations