Gene

si:dkey-46i9.6

ID
ZDB-GENE-160114-63
Name
si:dkey-46i9.6
Symbol
si:dkey-46i9.6 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to enable zinc ion binding activity. Predicted to act upstream of or within immune system process. Predicted to be located in cytoplasm. Orthologous to human TRIM29 (tripartite motif containing 29) and TRIM65 (tripartite motif containing 65).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With si:dkey-46i9.6 Human Ortholog
No data available
Associated With si:dkey-46i9.6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR000315 B-box-type zinc finger
Domain IPR001841 Zinc finger, RING-type
Domain IPR001870 B30.2/SPRY domain
Domain IPR003877 SPRY domain
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Domain Details Per Protein
Protein Additional Resources Length B30.2/SPRY domain B30.2/SPRY domain superfamily B-box-type zinc finger Butyrophylin-like, SPRY domain Concanavalin A-like lectin/glucanase domain superfamily E3 ubiquitin-protein ligase TRIM/RNF SPRY-associated SPRY domain Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:A0A8N7TE82 InterPro 568
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 7
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:dkey-46i9.6-201 (1)
Ensembl
Ensembl 5,379 nt
ZFIN BLAST
mRNA si:dkey-46i9.6-202 (1)
Ensembl
Ensembl 1,680 nt
ZFIN BLAST
mRNA si:dkey-46i9.6-203 (1)
Ensembl
Ensembl 5,958 nt
ZFIN BLAST
1 - 3 of 3
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-46I9ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_695591 (1)2222 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX664721 (1)130851 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8N7TE82 (1)568 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
TSV
1 - 1 of 1
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