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General Information
ZIRC
ZFIN ID: ZDB-GENE-160113-76
Gene Name: vimentin-related 2
Gene Symbol: vimr2
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Name: si:dkey-76i15.1 (1)

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have structural molecule activity; predicted to localize to the intermediate filament.
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Segmentation:20-25 somites (19.0h-22.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH vimr2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH vimr2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component intermediate filament (more)
Molecular Function structural molecule activity (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR039008 (1)
  • PROSITE:PS51842 (1)
  • Pfam:PF00038 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA vimr2-201 (1) 3102
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM vimr2 No data available
    MARKER RELATIONSHIPS
    vimr2Contained in: [BAC] DKEY-61O11 (1) (order this), DKEY-76I15 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009291199 (1)
    Genomic GenBank:AL929104 (1) 187365bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q483 (1) 414aa
    Sequence Information (all 9)
    ORTHOLOGY for vimr2 (Chr: 14)
    CITATIONS (10)