ZFIN is now using GRCz12tu for Genomic Data
Gene
colec10
- ID
- ZDB-GENE-131127-525
- Name
- collectin sub-family member 10 (C-type lectin)
- Symbol
- colec10 Nomenclature History
- Previous Names
-
- si:ch211-93i7.4 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Human ortholog(s) of this gene implicated in 3MC syndrome 3. Orthologous to human COLEC10 (collectin subfamily member 10).
- Genome Resources
- Note
-
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Abu Nahia et al., 2024
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| 3MC syndrome 3 | Alliance | 3MC syndrome 3 | 248340 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Calcium-dependent Lectin | Collagen triple helix repeat | C-type lectin fold | C-type lectin-like | C-type lectin-like/link domain superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0R4IRN4 | InterPro | 271 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
colec10-201
(1)
|
Ensembl | 1,376 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers