Gene

znf638

ID

ZDB-GENE-141216-265

Name

zinc finger protein 638

Symbol

znf638 Nomenclature History

Previous Names

si:ch211-212k18.4

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to have mRNA binding activity. Predicted to be involved in regulation of translation. Predicted to localize to nucleus. Orthologous to human ZNF638 (zinc finger protein 638).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With znf638 Human Ortholog

No data available

Associated With znf638 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR000690	Matrin/U1-C, C2H2-type zinc finger
Domain	IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
Family	IPR026811	Cip1-interacting zinc finger protein
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily

Domain Details Per Protein

Protein	Length	Cip1-interacting zinc finger protein	Matrin/U1-C, C2H2-type zinc finger	Matrin/U1-C-like, C2H2-type zinc finger	Nucleotide-binding alpha-beta plait domain superfamily	RNA-binding domain superfamily	RNA recognition motif domain	Zinc finger C2H2 superfamily
UniProtKB:A0A8M3AU39 InterPro	2194
UniProtKB:A0A8M9QCJ6 InterPro	2306
UniProtKB:A0A8M9QHK5 InterPro	2307
UniProtKB:A0A0R4IZ89 InterPro	2195

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	si:ch211-212k18.4-201 (1) Ensembl	Ensembl		7,105 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-212k18.4-202 (1) Ensembl	Ensembl		6,802 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations