ZFIN is now using GRCz12tu for Genomic Data
Gene
bdp1
- ID
- ZDB-GENE-141211-2
- Name
- BDP1 general transcription factor IIIB subunit
- Symbol
- bdp1 Nomenclature History
- Previous Names
-
- si:dkey-259h22.1 (1)
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable RNA polymerase III type 3 promoter sequence-specific DNA binding activity. Predicted to be involved in RNA polymerase III preinitiation complex assembly and positive regulation of transcription by RNA polymerase III. Predicted to be part of transcription factor TFIIIB complex.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| autosomal recessive nonsyndromic deafness 112 | Alliance | ?Deafness, autosomal recessive 112 | 618257 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Homedomain-like superfamily | SANT/Myb domain | Transcription factor TFIIIB component B'', Myb domain |
|---|---|---|---|---|---|
| UniProtKB:A0A8M9Q9Q0 | InterPro | 2292 | |||
| UniProtKB:A0A8M3AZV6 | InterPro | 2293 | |||
| UniProtKB:A0A8M9PLE0 | InterPro | 2288 | |||
| UniProtKB:A0AC58JLU6 | InterPro | 2287 | |||
| UniProtKB:A0AC58JLU8 | InterPro | 2279 | |||
| UniProtKB:A0AC58JLU9 | InterPro | 2274 | |||
| UniProtKB:A0AC58JLV3 | InterPro | 2273 | |||
| UniProtKB:A0AC58JLW0 | InterPro | 2278 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
bdp1-201
(1)
|
Ensembl | 1,468 nt | ||
| mRNA |
si:ch211-204c21.1-207
(1)
|
Ensembl | 2,021 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers