Gene

arid3a

ID

ZDB-GENE-140106-97

Name

AT-rich interactive domain 3A

Symbol

arid3a Nomenclature History

Previous Names

im:7156356 (1)
si:ch211-248i1.2
zmp:0000001137 (1)

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to localize to nucleus. Orthologous to human ARID3A (AT-rich interaction domain 3A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With arid3a Human Ortholog

No data available

Associated With arid3a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001606	ARID DNA-binding domain
Domain	IPR023334	REKLES domain
Family	IPR045147	AT-rich interactive domain-containing protein 3
Homologous_superfamily	IPR036431	ARID DNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	ARID DNA-binding domain	ARID DNA-binding domain superfamily	AT-rich interactive domain-containing protein 3	REKLES domain
UniProtKB:A0A8M9PAK0 InterPro	462
UniProtKB:A0A0N4STX9 InterPro	524

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	arid3a-201 (1) Ensembl	Ensembl		2,504 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations