Gene
malrd1
- ID
- ZDB-GENE-140106-257
- Name
- MAM and LDL receptor class A domain containing 1
- Symbol
- malrd1 Nomenclature History
- Previous Names
-
- zmp:0000001297
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Orthologous to human MALRD1 (MAM and LDL receptor class A domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa8852 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa18339 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa31588 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa34149 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa40980 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR023415 | Low-density lipoprotein (LDL) receptor class A, conserved site |
| Domain | IPR000742 | EGF-like domain |
| Domain | IPR000998 | MAM domain |
| Family | IPR051560 | MAM domain-containing protein |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR036055 | LDL receptor-like superfamily |
| Repeat | IPR002172 | Low-density lipoprotein (LDL) receptor class A repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Concanavalin A-like lectin/glucanase domain superfamily | EGF-like domain | LDL receptor-like superfamily | Low-density lipoprotein (LDL) receptor class A, conserved site | Low-density lipoprotein (LDL) receptor class A repeat | MAM domain | MAM domain-containing protein |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7F1Z9 | InterPro | 1793 | |||||||
| UniProtKB:A0A8M9Q147 | InterPro | 1792 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
malrd1-201
(1)
|
Ensembl | 8,462 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-10F23 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-29A11 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001287549 (1) | 5877 nt | ||
| Genomic | GenBank:BX005319 (1) | 225639 nt | ||
| Polypeptide | UniProtKB:E7F1Z9 (1) | 1793 aa |
- Comparative Orthology
- Alliance