Gene
si:dkey-108k21.21
- ID
- ZDB-GENE-131127-5
- Name
- si:dkey-108k21.21
- Symbol
- si:dkey-108k21.21 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Description
- Predicted to enable DNA binding activity. Predicted to be a structural constituent of chromatin. Predicted to act upstream of or within nucleosome assembly. Predicted to be located in chromosome and nucleus. Predicted to be part of nucleosome. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia. Orthologous to human H1-2 (H1.2 linker histone, cluster member) and H1-5 (H1.5 linker histone, cluster member).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Linker histone H1/H5 | Linker histone H1/H5, domain H15 | Winged helix DNA-binding domain superfamily | Winged helix-like DNA-binding domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:A0A2R8Q0U0 | InterPro | 206 | ||||
| UniProtKB:A0A8M2BI26 | InterPro | 271 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-108k21.21-201
(1)
|
Ensembl | 717 nt | ||
| mRNA |
si:dkey-108k21.21-202
(1)
|
Ensembl | 621 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-108K21 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_005170727 (1) | 1083 nt | ||
| Genomic | GenBank:CU302436 | 158999 nt | ||
| Polypeptide | UniProtKB:A0A8M2BI26 (1) | 271 aa |
No data available
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Chen, W.C., Wang, Z., Missinato, M.A., Park, D.W., Long, D.W., Liu, H.J., Zeng, X., Yates, N.A., Kim, K., Wang, Y. (2016) Decellularized zebrafish cardiac extracellular matrix induces mammalian heart regeneration. Science advances. 2:e1600844
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