Gene

si:ch211-256e16.3

ID
ZDB-GENE-131127-256
Name
si:ch211-256e16.3
Symbol
si:ch211-256e16.3 Nomenclature History
Previous Names
  • zmp:0000000635
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of Cul3-RING ubiquitin ligase complex. Predicted to be active in cytoplasm.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa12301Allele with one point mutationUnknownSplice SiteENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
1 - 1 of 1
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Sequence Targeting Reagents
No data available
Human Disease
Associated With si:ch211-256e16.3 Human Ortholog
No data available
Associated With si:ch211-256e16.3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000210 BTB/POZ domain
Domain IPR011705 BTB/Kelch-associated
Family IPR017096 BTB-kelch protein
Homologous_superfamily IPR011333 SKP1/BTB/POZ domain superfamily
Homologous_superfamily IPR015915 Kelch-type beta propeller
1 - 5 of 6 Show all
Domain Details Per Protein
Protein Length BTB/Kelch-associated BTB-kelch protein BTB/POZ domain Kelch repeat type 1 Kelch-type beta propeller SKP1/BTB/POZ domain superfamily
UniProtKB:X1WD22
InterPro
621
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 3
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:ch211-256e16.3-201 (1)
Ensembl
Ensembl 2,715 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-256E16ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_003198186 (1)
ZFIN BLASTNCBI BLASTMegaBLASTEnsemblUCSC BLAT
GenomicGenBank:CT583687 (1)157426 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:X1WD22 (1)621 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
No data available
Citations
TSV
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