Gene

lsp1a

ID

ZDB-GENE-131127-171

Name

lymphocyte specific protein 1 a

Symbol

lsp1a Nomenclature History

Previous Names

lsp1
si:ch211-201m7.3 (1)

Type

protein_coding_gene

Location

Chr: 25 Mapping Details/Browsers

Description

Predicted to have actin binding activity; calmodulin binding activity; and myosin binding activity. Predicted to be involved in muscle contraction. Orthologous to human LSP1 (lymphocyte specific protein 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With lsp1a Human Ortholog

No data available

Associated With lsp1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR006017	Caldesmon
Family	IPR006018	Caldesmon/lymphocyte specific protein

Domain Details Per Protein

Protein	Length	Caldesmon	Caldesmon/lymphocyte specific protein
UniProtKB:A0A8M1RN68 InterPro	568

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	lsp1-201 (1) Ensembl	Ensembl		3,470 nt	Select Tool
ncRNA	lsp1-002 (1) Ensembl	Ensembl		781 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations