Gene

gga3b

ID

ZDB-GENE-131126-18

Name

golgi associated, gamma adaptin ear containing, ARF binding protein 3b

Symbol

gga3b Nomenclature History

Previous Names

si:ch73-157i16.3

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to have ADP-ribosylation factor binding activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to localize to trans-Golgi network. Orthologous to human GGA3 (golgi associated, gamma adaptin ear containing, ARF binding protein 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gga3b Human Ortholog

No data available

Associated With gga3b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002014	VHS domain
Domain	IPR004152	GAT domain
Domain	IPR008152	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
Domain	IPR008153	Gamma-adaptin ear (GAE) domain
Domain	IPR041198	N-terminal extension of GAT domain
Domain	IPR044111	GGA3, GAT domain
Family	IPR027422	ADP-ribosylation factor-binding protein GGA1-3
Homologous_superfamily	IPR008942	ENTH/VHS
Homologous_superfamily	IPR013041	Clathrin adaptor, appendage, Ig-like subdomain superfamily
Homologous_superfamily	IPR038425	GAT domain superfamily

Domain Details Per Protein

Protein	Length	ADP-ribosylation factor-binding protein GGA1-3	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain	Clathrin adaptor, appendage, Ig-like subdomain superfamily	ENTH/VHS	Gamma-adaptin ear (GAE) domain	GAT domain	GAT domain superfamily	GGA3, GAT domain	N-terminal extension of GAT domain	VHS domain
UniProtKB:A0A2R8RKX3 InterPro	635
UniProtKB:A0A0R4ISY9 InterPro	709

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	gga3 (1 of many)-201 (1) Ensembl	Ensembl	2,288 nt	Select Tool ZFIN BLAST
mRNA	gga3b-202 (1) Ensembl	Ensembl	4,299 nt	Select Tool ZFIN BLAST
mRNA	gga3b-203 (1) Ensembl	Ensembl	4,363 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations