Gene

si:ch211-40k21.9

ID

ZDB-GENE-131122-64

Name

si:ch211-40k21.9

Symbol

si:ch211-40k21.9 Nomenclature History

Previous Names

im:7151855 (1)
si:ch211-253b1.6

Type

protein_coding_gene

Location

Chr: 24 Mapping Details/Browsers

Description

Predicted to have DNA binding activity and metal ion binding activity.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7151855 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:ch211-40k21.9 Human Ortholog

No data available

Associated With si:ch211-40k21.9 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR006612	THAP-type zinc finger
Family	IPR026516	THAP domain-containing protein 1/10
Homologous_superfamily	IPR038441	THAP-type zinc finger superfamily

Domain Details Per Protein

Protein	Length	THAP domain-containing protein 1/10	THAP-type zinc finger	THAP-type zinc finger superfamily
UniProtKB:A0A8M6YVR4 InterPro	196
UniProtKB:A0A8M1RMT2 InterPro	292

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	si:ch211-40k21.9-201 (1) Ensembl	Ensembl		1,336 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations