ZFIN is now using GRCz12tu for Genomic Data
Gene
si:ch211-210b2.4
- ID
- ZDB-GENE-131122-12
- Name
- si:ch211-210b2.4
- Symbol
- si:ch211-210b2.4 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable transmembrane transporter binding activity. Predicted to be active in plasma membrane. Orthologous to several human genes including TCAF1 (TRPM8 channel associated factor 1) and TCAF2 (TRPM8 channel associated factor 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR031161 | Peptidase family M60 domain |
| Domain | IPR035423 | M60-like domain, N-terminal |
| Family | IPR051244 | TRPM8 Channel-Associated Factors |
| Homologous_superfamily | IPR029062 | Class I glutamine amidotransferase-like |
| Homologous_superfamily | IPR042279 | Peptidase M60, enhancin-like domain 3 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Class I glutamine amidotransferase-like | M60-like domain, N-terminal | Peptidase family M60 domain | Peptidase M60, enhancin-like domain 3 | TRPM8 Channel-Associated Factors |
|---|---|---|---|---|---|---|---|
| UniProtKB:X1WD01 | InterPro | 912 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-210b2.4-201
(1)
|
Ensembl | 3,046 nt | ||
| mRNA |
si:ch211-210b2.4-202
(1)
|
Ensembl | 1,891 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers