Gene

neo1b

ID

ZDB-GENE-131121-320

Name

neogenin 1b

Symbol

neo1b Nomenclature History

Previous Names

fj41a03
si:ch1073-116k13.1
si:ch211-254l20.1 (1)
wu:fj41a03 (1)
zmp:0000000764 (1)

Type

protein_coding_gene

Location

Chr: 25 Mapping Details/Browsers

Description

Predicted to have signaling receptor activity. Predicted to be involved in axon guidance; iron ion homeostasis; and positive regulation of BMP signaling pathway. Predicted to localize to integral component of plasma membrane. Orthologous to human NEO1 (neogenin 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Brown et al., 2019
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With neo1b Human Ortholog

No data available

Associated With neo1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR003961	Fibronectin type III
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR010560	Neogenin, C-terminal
Domain	IPR013098	Immunoglobulin I-set
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin domain subtype	Immunoglobulin I-set	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype 2	Neogenin, C-terminal
UniProtKB:A0A8M9Q8A4 InterPro	143
UniProtKB:E7F004 InterPro	1413
UniProtKB:A0A8M3B6X0 InterPro	1432
UniProtKB:A0A8M6YW07 InterPro	1413
UniProtKB:A0A8M6YWL9 InterPro	1394
UniProtKB:A0A8M6YYH3 InterPro	1383
UniProtKB:A0A8M6Z4F7 InterPro	1408
UniProtKB:A0A8M6Z527 InterPro	1352

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	neo1b-201 (1) Ensembl	Ensembl	5,028 nt	Select Tool ZFIN BLAST
mRNA	neo1b-202 (1) Ensembl	Ensembl	869 nt	Select Tool ZFIN BLAST
mRNA	neo1b-203 (1) Ensembl	Ensembl	3,174 nt	Select Tool ZFIN BLAST
mRNA	neo1b-204 (1) Ensembl	Ensembl	828 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations