Gene

srrm3

ID

ZDB-GENE-131121-284

Name

serine/arginine repetitive matrix 3

Symbol

srrm3 Nomenclature History

Previous Names

si:zfos-375h5.1 (2)

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to have mRNA binding activity.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Ciampi et al., 2022

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 5 figures from Ciampi et al., 2022
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With srrm3 Human Ortholog

No data available

Associated With srrm3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR013170	mRNA splicing factor Cwf21 domain
Domain	IPR029360	Serine/arginine repetitive matrix protein, C-terminal
Domain	IPR047489	Serine/arginine repetitive matrix protein 3, cwf21 domain
Family	IPR052109	Serine/Arginine Repetitive Matrix Domain-Containing Protein

Domain Details Per Protein

Protein	Length	mRNA splicing factor Cwf21 domain	Serine/Arginine Repetitive Matrix Domain-Containing Protein	Serine/arginine repetitive matrix protein 3, cwf21 domain	Serine/arginine repetitive matrix protein, C-terminal
UniProtKB:A0A8M6YYC1 InterPro	569
UniProtKB:X1WCS6 InterPro	196

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	si:zfos-375h5.1-201 (1) Ensembl	Ensembl		3,002 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations