ZFIN is now using GRCz12tu for Genomic Data
        
        
        Gene
si:ch211-202f3.4
- ID
 - ZDB-GENE-131120-116
 - Name
 - si:ch211-202f3.4
 - Symbol
 - si:ch211-202f3.4 Nomenclature History
 - Previous Names
 - None
 - Type
 - protein_coding_gene
 - Location
 - Chr: 17 Mapping Details/Browsers
 - Genome Assembly
 - GRCz12tu
 - Annotation Status
 - Current
 - Description
 - Predicted to enable calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in eosinophilic esophagitis. Orthologous to human CAPN14 (calpain 14).
 - Genome Resources
 - Note
 - None
 - Comparative Information
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- All Expression Data
 - 2 figures from Ma et al., 2019
 - Cross-Species Comparison
 - High Throughput Data
 - Thisse Expression Data
 - No data available
 
                
                    
                        Wild Type Expression Summary
                    
                    
                
                
            
        
        
    
        
            
                
            
        
    
    
    - All Phenotype Data
 - No data available
 - Cross-Species Comparison
 - Alliance
 
                
                    
                        Phenotype Summary
                    
                    
                
                
            
        
        
    
        
            
                
            
        
    
    
    
                
                    
                        Mutations
                    
                    
                
                
            
        
        
    
        
            
            
    
    
                
                    
                        Human Disease
                    
                    
                
                
            
        
        
    
        
            
            
    
    
                
                    
                        Domain, Family, and Site Summary
                    
                    
                
                
            
        
        
    
        
            
                
    
        
    | Type | InterPro ID | Name | 
|---|---|---|
| Domain | IPR001300 | Peptidase C2, calpain, catalytic domain | 
| Domain | IPR022682 | Peptidase C2, calpain, large subunit, domain III | 
| Domain | IPR022683 | Peptidase C2, calpain, domain III | 
| Family | IPR022684 | Peptidase C2, calpain family | 
| Homologous_superfamily | IPR036213 | Calpain large subunit, domain III superfamily | 
| Homologous_superfamily | IPR038765 | Papain-like cysteine peptidase superfamily | 
                
                    
                        Domain Details Per Protein
                    
                    
                
                
            
        
        
    
        
            
                
    
        
    | Protein | Additional Resources | Length | Calpain large subunit, domain III superfamily | Papain-like cysteine peptidase superfamily | Peptidase C2, calpain, catalytic domain | Peptidase C2, calpain, domain III | Peptidase C2, calpain family | Peptidase C2, calpain, large subunit, domain III | 
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PLL2 | InterPro | 404 | ||||||
| UniProtKB:E7F0H3 | InterPro | 523 | ||||||
| UniProtKB:A0AB40ECQ1 | InterPro | 462 | 
- Genome Browsers
 
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis | 
|---|---|---|---|---|---|
| mRNA | 
                    
                        
                        
                            capn14-201
                             (1)
                            
                                
 | 
                
                Ensembl | 2,542 nt | ||
| mRNA | 
                    
                        
                        
                            si:ch211-202f3.4-201
                             (1)
                            
                                
 | 
                
                Ensembl | 1,599 nt | 
                
                    
                        Interactions and Pathways
                    
                    
                
                
            
        
        
    
        
            
            
    
    
        
    
No data available
    
        
        
    
    
    
                
                    
                        Plasmids
                    
                    
                
                
            
        
        
    
        
            
            
    
    
        
    
No data available
    
        
        
    
    
    - Genome Browsers