ZFIN is now using GRCz12tu for Genomic Data
Gene
si:dkey-239b22.1
- ID
- ZDB-GENE-131119-12
- Name
- si:dkey-239b22.1
- Symbol
- si:dkey-239b22.1 Nomenclature History
- Previous Names
-
- zmp:0000000578
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to act upstream of or within cell-matrix adhesion. Predicted to be located in membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001007 | VWFC domain |
| Domain | IPR001507 | Zona pellucida domain |
| Domain | IPR001846 | von Willebrand factor, type D domain |
| Domain | IPR002919 | Trypsin Inhibitor-like, cysteine rich domain |
| Domain | IPR003886 | NIDO domain |
| Domain | IPR014853 | VWF/SSPO/Zonadhesin-like, cysteine-rich domain |
| Domain | IPR025615 | TILa domain |
| Domain | IPR055355 | ZP-C domain |
| Family | IPR052749 | Alpha-tectorin |
| Homologous_superfamily | IPR036084 | Serine protease inhibitor-like superfamily |
| Homologous_superfamily | IPR042235 | Zona pellucida, ZP-C domain |
Domain Details Per Protein
| Protein | Additional Resources | Length | Alpha-tectorin | NIDO domain | Serine protease inhibitor-like superfamily | TILa domain | Trypsin Inhibitor-like, cysteine rich domain | von Willebrand factor, type D domain | VWFC domain | VWF/SSPO/Zonadhesin-like, cysteine-rich domain | Zona pellucida domain | Zona pellucida, ZP-C domain | ZP-C domain |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AYM0 | InterPro | 5336 | |||||||||||
| UniProtKB:A0A8M6Z1G7 | InterPro | 3880 | |||||||||||
| UniProtKB:A0A8M6Z9E8 | InterPro | 3880 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-239b22.1-201
(1)
|
Ensembl | 16,334 nt | ||
| mRNA |
si:dkey-239b22.1-202
(1)
|
Ensembl | 3,233 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers