Gene
si:ch211-210b2.2
- ID
- ZDB-GENE-131118-33
- Name
- si:ch211-210b2.2
- Symbol
- si:ch211-210b2.2 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Predicted to enable transmembrane transporter binding activity. Predicted to be active in plasma membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa35773 | Allele with one point mutation | Unknown | Splice Site | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR031161 | Peptidase family M60 domain |
| Domain | IPR035423 | M60-like domain, N-terminal |
| Family | IPR051244 | TRPM8 Channel-Associated Factors |
| Homologous_superfamily | IPR029062 | Class I glutamine amidotransferase-like |
| Homologous_superfamily | IPR042279 | Peptidase M60, enhancin-like domain 3 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Class I glutamine amidotransferase-like | M60-like domain, N-terminal | Peptidase family M60 domain | Peptidase M60, enhancin-like domain 3 | TRPM8 Channel-Associated Factors |
|---|---|---|---|---|---|---|---|
| UniProtKB:X1WER5 | InterPro | 908 | |||||
| UniProtKB:A0A8M3APG4 | InterPro | 577 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-210b2.2-201
(1)
|
Ensembl | 2,310 nt | ||
| mRNA |
si:ch211-210b2.2-202
(1)
|
Ensembl | 3,039 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-210B2 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_009291355 (1) | |||
| Genomic | GenBank:BX248582 (1) | 52785 nt | ||
| Polypeptide | UniProtKB:X1WER5 (1) | 908 aa |
No data available
- Lisse, T.S., King, B.L., Rieger, S. (2016) Comparative transcriptomic profiling of hydrogen peroxide signaling networks in zebrafish and human keratinocytes: Implications toward conservation, migration and wound healing. Scientific Reports. 6:20328
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
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